Pairwise Alignments

Query, 296 a.a., Geranylgeranyl pyrophosphate synthase from Pseudomonas stutzeri RCH2

Subject, 323 a.a., octaprenyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 83.6 bits (205), Expect = 6e-21
 Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 17/226 (7%)

Query: 53  GKRLRPLLLLLALSDLGIDPDIGLDLACALEMIHAASLFLDDMPCMDNASLRRGQPTIHL 112
           GKRLRPLL +L+   LG         A  +E IH A+L  DD+  +D + LRRG+ T + 
Sbjct: 44  GKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANA 101

Query: 113 RFGEDVAVLASVALLSHAYGI-TATAPRLTPRQRNDAVAILARSVGAQGLVRGQFRDLHG 171
            FG   +VL    + + ++ + T        +  +DAV ++A          G+ + L  
Sbjct: 102 AFGNAASVLVGDFIYTRSFQMMTELGSMKILKLMSDAVNVIAE---------GEVQQLMN 152

Query: 172 AQEAQQLDA-VIATNQLKTASLFTAALEVAALLAGAERTRTRHLQGFANQLGLAFQLLDD 230
             +    +A  +     KTA LF AA ++ A+L  A       +Q +   LG AFQL+DD
Sbjct: 153 CNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDD 212

Query: 231 IADGLTP-EQTGKNCQQD--RTKATVVSLLGQQAAE-QQLATHREA 272
           + D  +  ++ GKN   D    K T+  L   Q    +Q A  REA
Sbjct: 213 VMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREA 258