Pairwise Alignments

Query, 296 a.a., Geranylgeranyl pyrophosphate synthase from Pseudomonas stutzeri RCH2

Subject, 299 a.a., (2E,6E)-farnesyl diphosphate synthase from Klebsiella michiganensis M5al

 Score =  127 bits (319), Expect = 3e-34
 Identities = 96/256 (37%), Positives = 133/256 (51%), Gaps = 9/256 (3%)

Query: 44  ALREGTLAPGKRLRPLLLLLALSDLGIDPDIGLDLACALEMIHAASLFLDDMPCMDNASL 103
           A++ G L  GKRLRP L+       G+        A A+E IHA SL  DD+P MD+  L
Sbjct: 35  AMQYGALLGGKRLRPFLVYATGDMFGVSRATLDAPAAAVECIHAYSLMHDDLPAMDDDDL 94

Query: 104 RRGQPTIHLRFGEDVAVLASVALLSHAYGITATAP--RLTPRQRNDAVAILARSVGAQGL 161
           RRGQPT H++FGE  A+LA  AL + A+ I + AP   +  R R   ++ LA++ G  G+
Sbjct: 95  RRGQPTCHIKFGEANAILAGDALQTLAFSILSDAPMAEVPDRDRLAMISELAQASGIAGM 154

Query: 162 VRGQFRDLHGAQEAQQLDAVIATNQLKTASLFTAALEVAALLAG-AERTRTRHLQGFANQ 220
             GQ  DL        L ++   ++ KT +L  AA+ + AL AG A R     L  +A  
Sbjct: 155 CGGQALDLEAEGHQVDLASLERIHRHKTGALIRAAVRMGALSAGDAGRRALPALDRYAEN 214

Query: 221 LGLAFQLLDDIADGLTPEQT-GK--NCQQDRTKATVVSLLGQQAAEQQ---LATHREAAL 274
           +GLAFQ+ DDI D +    T GK     Q   K+T  +LLG + A ++   L T    +L
Sbjct: 215 IGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKAHDLITDARRSL 274

Query: 275 THLDAAGLGDGELAAM 290
           T L A  L    L A+
Sbjct: 275 TELAAQSLDTTALEAL 290