Pairwise Alignments

Query, 581 a.a., NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain from Pseudomonas stutzeri RCH2

Subject, 574 a.a., sodium/hydrogen exchanger family/TrkA domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  698 bits (1802), Expect = 0.0
 Identities = 347/571 (60%), Positives = 445/571 (77%), Gaps = 1/571 (0%)

Query: 1   MDLGNLNHLFFIGALLVAASILMSSLSNRLGVPILVIFLAVGMLAGVDGVGGIVFGDYQL 60
           MD  ++N  F IGALL A S+L+S +S+RLG+PIL+IFLAVG+LAG DG GGI+F DY  
Sbjct: 1   MDADSINSFFLIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYST 60

Query: 61  AFIISNLALAVILLDGGMRTRTATFRVALKPAFSLATLGVAITSGLTGLAAAWLFDLPLL 120
           A+++SN ALA+ILLDGGMRTR A+FRVAL PA SLAT GVAIT+ +TG+ AAWLFDL  L
Sbjct: 61  AYLVSNFALAIILLDGGMRTRVASFRVALWPALSLATFGVAITTSITGVMAAWLFDLHWL 120

Query: 121 QGLLIGAIVGSTDAAVVFNLLNGKGLNERVGSTLEIESGSNDPMAMFLTVALIDMLLAGR 180
           QGLL+GAIVGSTDAA VF+LL G+ LNERVG+TLEIESGSNDPMA+FLTV LI +L    
Sbjct: 121 QGLLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGSNDPMAVFLTVTLIAILANVG 180

Query: 181 TTFGWDFLL-TLLQQFGIGTVLGLLGGWLLLQLINRLSVADGLYPLLAVAGGLMIFALSG 239
                 F+L + ++QFG+G +LGL GGWLL +L+N   +A+GLY +L ++GGLMI+A S 
Sbjct: 181 AELSASFMLISFIKQFGLGVLLGLGGGWLLWKLVNVSKLAEGLYSILVLSGGLMIYATSN 240

Query: 240 AIGGSGILAIYVCGLLLGNRPIRNRHGILHMFDGLAWLSQISMFLVLGLLLTPSELLPIA 299
            +GGSGIL+IY+ GL LGN+P R RH IL++ DG+ W+SQI MFLVLGLLLTPS+LL I 
Sbjct: 241 KLGGSGILSIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDLLDIW 300

Query: 300 LPALALSLWMILFARPLAVFVSLLPFRSFHLRERLFISWIGLRGAVPVILAVFPLMAGLE 359
           LP LAL+  MILFARPLAV++SLLPF+SF  R+R FISW+GLRGAVP+ILAVFP+MAGL 
Sbjct: 301 LPGLALAFGMILFARPLAVWLSLLPFKSFGSRDRWFISWVGLRGAVPIILAVFPMMAGLP 360

Query: 360 NAQLFFNVAFFIVLVSLLLQGSTLAWAAKKAKVEVPPSPMPVSRSGLQVHTTSQWEMFVY 419
            AQL+FN+AFF+V+VSLL+QG++L  AA+ AKVE+PP P+P+SRSG++++  S+WE+FVY
Sbjct: 361 GAQLYFNLAFFVVIVSLLVQGASLTTAARLAKVELPPKPLPISRSGVEIYPKSEWEVFVY 420

Query: 420 RLSASKWCVGAALRELKMPPGTRIAALFRGKELLHPSGSTRLQVDDILCVIGHDEDLPAL 479
            LS SKWC+G  L+ L MP GTRIAA+FR   LLHPSGST L+  DILCV+G ++ L AL
Sbjct: 421 CLSESKWCIGEPLKRLAMPDGTRIAAVFRNNTLLHPSGSTCLEAGDILCVLGQEKSLEAL 480

Query: 480 GKLFSQAPTRGQDLRFFGDFILEADAQLSAIAALYGLKLREVDGNQTIGAFMAEQVSGNP 539
             LFSQAP   +  RFFGDF ++ + +L+ +A +YGL L +  G  T+   +A ++  +P
Sbjct: 481 SNLFSQAPETDEVSRFFGDFFIDTEVKLADLAPIYGLTLDDETGAMTVADLVALELGAHP 540

Query: 540 VVGDQVEWNGLTWTVAAMEAGEVRKVGLKFP 570
           V+GDQ  W  L W VA +  G+V  VG++ P
Sbjct: 541 VLGDQFLWQSLHWVVAGLYEGKVTNVGIRLP 571