Pairwise Alignments

Query, 1096 a.a., Small-conductance mechanosensitive channel from Pseudomonas stutzeri RCH2

Subject, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

 Score = 97.4 bits (241), Expect = 2e-24
 Identities = 79/257 (30%), Positives = 128/257 (49%), Gaps = 12/257 (4%)

Query: 816  LNNLLGALLIIAITVALARNLPGLLEVMVLSKLRLAQGSAYATTTLLSYALAGFGIVATL 875
            L  L  +LLII  T  ++      L +    + + A+    AT    S  +  FGIV  +
Sbjct: 93   LKILTYSLLIIYFTYRISNRSKRYLLLKGSQEGKFAEYRLKATVFHYSAMIIAFGIVFQM 152

Query: 876  STLGVSWDKLQWLVAALSVG--LGFGLQEIFANFISGLIILFERPVRIGDVVTIGNLSGT 933
              LG++      LVA    G  LGF  Q + ANFISG+ + F++P++IGD V IG  SG 
Sbjct: 153  --LGLTSKLGTLLVAGGITGIILGFASQTVVANFISGIFLYFDKPLKIGDSVQIGTNSGI 210

Query: 934  VSRIRIRATTITDFDRKDIIVPNKTFITGQLINWSLSDTVTRVTLKVGVAYGSDLEQVKT 993
            V+ I++ +T I  +D   + +PN+     +++N +      RV + VG+AY  D ++   
Sbjct: 211  VNDIKMMSTRIRTWDGVLVRIPNEKVFNSEIVN-NKKYPARRVDIVVGIAYKEDAQRAMD 269

Query: 994  LLYKAAQANPRVLKDPEPQVFFLNFGESTLDHELRIHVRDLGDRNPATD---EINRFIDR 1050
            ++ K  +    VL +PE Q+F  + G S++D    I V+         D   E+ + I +
Sbjct: 270  IISKILENMTYVLVEPEFQIFVNDLGNSSVD----ISVKAWTPSEKWYDVKMELVKNIKK 325

Query: 1051 EFNKAGINIAFRQVDVF 1067
            EF+K  + I F Q  V+
Sbjct: 326  EFDKEKVEIPFPQRTVW 342