Pairwise Alignments

Query, 641 a.a., ATP-dependent DNA helicase, RecQ family from Pseudomonas stutzeri RCH2

Subject, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

 Score =  268 bits (686), Expect = 4e-76
 Identities = 140/345 (40%), Positives = 216/345 (62%), Gaps = 10/345 (2%)

Query: 3   EQTLVQTFGYDRFRTGQEQAIRAVVAGRSVAAIFPTGSGKSLCYQLPALLLPHLTLVVSP 62
           E+ L + FGY +FR GQ++ I A +AGR    I PTG GKSLCYQ+PAL+L  +TLV+SP
Sbjct: 17  ERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISP 76

Query: 63  LLALMQDQLAFLHRHGIAAASIDSAQSREQASETMARAKSGELKILMISVERLKNERFRN 122
           L++LM+DQ+  L  +G+AA  ++S  +RE+      R  +G+LK+L +S ER+    F  
Sbjct: 77  LISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIE 136

Query: 123 FISQVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQVLLLTATATPPVIADMQ 182
            +S +P++++ VDEAHCIS+WGH+FRP+Y  L   +++F    V+ LTATA      D+ 
Sbjct: 137 RLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196

Query: 183 GKFAIAADDVVTTGFYRPNLN-LLVE---PVSGFNKQRRLVEWLGDKSGQPTIVYVTQQK 238
            +  +         F RPN+  +LVE   PVS      +++ +L  + GQ  I+Y   +K
Sbjct: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVS------QVIRYLETQRGQCGIIYCGSRK 250

Query: 239 TAEQIAEHLAQRGFPASAYHAGMAHELRESIQRRFMAGELNCIVATIAFGMGIDKADIRN 298
             E + E L      A++YHAGM  + R  +Q  F   +L  +VAT+AFGMGI+K ++R 
Sbjct: 251 KVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRF 310

Query: 299 VVHYDLPKSVENYSQEIGRAGRDGQPSDCLVLANRDSLSVLQNFV 343
           VVH+D+P+++E+Y QE GRAGRDG P++ ++L +   ++ L+  +
Sbjct: 311 VVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML 355