Pairwise Alignments

Query, 360 a.a., Signal transduction histidine kinase, nitrogen specific from Pseudomonas stutzeri RCH2

Subject, 348 a.a., nitrogen regulation protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  288 bits (737), Expect = 2e-82
 Identities = 163/344 (47%), Positives = 219/344 (63%), Gaps = 5/344 (1%)

Query: 10  LIENLTTATLLLNSRLRLEYMNPAAEMLLAVSGQRSHGQFISELFTESPEALAALRQAVE 69
           L+ +L TA L+++  L+  Y N AAE LL V   R   Q + E +         L  AV+
Sbjct: 6   LLNHLVTAVLVIDKDLKPCYANAAAEQLLGVGSHRLVEQALPEHYQALGVDTQLLSDAVK 65

Query: 70  EAHPFTKREATLTSATGQSLTVDYAVTPVLTRQETMLLLEVLPRDRLLRITKEEAQLSKQ 129
                T   ATL +   Q  TVD  + P L  +  + LLE+   D+  RI ++ +Q ++Q
Sbjct: 66  AGQSLTVNTATLVTLDAQHHTVDLTLIP-LEDEALLSLLELRQVDQQRRIHQQLSQDAQQ 124

Query: 130 ETTKMLVRGLAHEIKNPLGGIRGAAQLLARELPEEHLKDYTEVIIEEADRLRNLVDRMLG 189
           +  + LVR LAHEIKNPLGG+RGAAQLL+REL +   K++T +IIE+ADRLR+LVDR+LG
Sbjct: 125 QAAQFLVRNLAHEIKNPLGGLRGAAQLLSRELDDPAQKEFTNLIIEQADRLRSLVDRLLG 184

Query: 190 SNKLPSLAMTNIHEVLEHVASLIEAECQGSIILVRDYDPSIPEVLMDREQMIQAVLNIMR 249
             +    ++ NIH+V++ V  L+E     +I L RDYDPSIP++ MD +QM QAVLNI++
Sbjct: 185 PQRPTQHSLHNIHQVVQKVYKLVEIALPANIQLKRDYDPSIPDIEMDPDQMQQAVLNILQ 244

Query: 250 NAMQALAGQNDLGLGRLTLRTRTLRQFTIGHIRHRLVARIEIIDNGPGIPAELQNTLFYP 309
           NA+QAL   +    G + +RTRT  Q TIG  RH+LV  + IIDNGPGIP EL +TLFYP
Sbjct: 245 NAVQALEHTD----GEILIRTRTQHQVTIGSQRHKLVLTLSIIDNGPGIPPELMDTLFYP 300

Query: 310 MVSGRPDGTGLGLAITQNIISQHQGLIECESHPGHTVFSIFLPL 353
           MV+ R  G+GLGL+I  NI   H G I+C S PGHT F I LP+
Sbjct: 301 MVTSREQGSGLGLSIAHNIARLHSGRIDCVSSPGHTEFIISLPI 344