Pairwise Alignments

Query, 360 a.a., Signal transduction histidine kinase, nitrogen specific from Pseudomonas stutzeri RCH2

Subject, 357 a.a., signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  168 bits (425), Expect = 2e-46
 Identities = 119/360 (33%), Positives = 191/360 (53%), Gaps = 26/360 (7%)

Query: 6   LQRLLIENLTTATLLLNSRLRLEYMNPAAEMLLAVSGQRS--HGQFISELFTESP--EAL 61
           L + L  +L    L+L+    +  +NPAAE  +  S QRS        +L  ++P  EA 
Sbjct: 4   LTQALWVSLPIPALILSGENTILELNPAAENFMNGS-QRSLLDAPVWDKLMVDAPLEEAF 62

Query: 62  AALRQAVEEAHPFTKREATLTSATGQSLTVDYAVTPVLTRQETMLLLEVLPRDRLLRITK 121
             +R+ +    P    +  + +     +  +  V+P++   E +LLL + PR+   R+ +
Sbjct: 63  DRVRKNLS---PLFINDVDVGTGERPPVLCNIQVSPLVDNPELVLLL-LEPREIAGRLGR 118

Query: 122 EEAQLSKQETTKMLVRGLAHEIKNPLGGIRGAAQLLARELPEEHLKDYTEVIIEEADRLR 181
                S  ++   +   LAHEIKNPL GI GAAQLL   L  E  ++ T++I+ E+ R+ 
Sbjct: 119 SMQSQSAAKSAIGMAEMLAHEIKNPLAGITGAAQLLGMNLSNED-RELTDLIVAESHRIV 177

Query: 182 NLVDRM--LGSNKLPSLAMTNIHEVLEHVASLIEAECQGSIILVRDYDPSIPEVLMDREQ 239
            L++++   G+ + P L   NIH+VLE             + +  DYDPS+P    D +Q
Sbjct: 178 KLLEQVEQFGNLRPPDLRPVNIHDVLERARRSAVVGFGAHVTIREDYDPSLPNTYADGDQ 237

Query: 240 MIQAVLNIMRNAMQALAGQNDLGLGRLTLRTRTLRQFTIGHIRHR------LVARIEIID 293
           ++Q  LN+++NA +A            T+R RT  + ++  +R +      +  +IEI+D
Sbjct: 238 LLQVFLNLLKNAAEACKPGG-------TIRIRTFYELSL-RLRRKDGSGGTVPLQIEIMD 289

Query: 294 NGPGIPAELQNTLFYPMVSGRPDGTGLGLAITQNIISQHQGLIECESHPGHTVFSIFLPL 353
           +GPG+P E+++ +F P VSGR +GTGLGLA+   IIS H G I  +S PG TVF I LP+
Sbjct: 290 DGPGLPPEIESDVFEPFVSGRENGTGLGLALVSKIISDHDGWIAVDSVPGRTVFRISLPV 349