Pairwise Alignments

Query, 790 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  227 bits (579), Expect = 1e-63
 Identities = 163/563 (28%), Positives = 267/563 (47%), Gaps = 39/563 (6%)

Query: 224 ESGLSAAIELSPALHARLTPAAS-YTAERLQTLA------LAFIAGGSLICLVSIG---- 272
           E  +S   +L   L + LTPA S ++AE  Q  +      L+F   GS I  V I     
Sbjct: 102 EKAISEQSQLVSVLASYLTPAVSVFSAELHQPNSNVVVGKLSFYIDGSSIAKVFIAKTTR 161

Query: 273 --------------LLLWLIRRYVTGPISQLDDQLTDLLQSKRTALD-EPTDGGEIGRLT 317
                         +LL    + ++ PI+ L   +  L  ++R+ L    T   E+  L 
Sbjct: 162 VLLFDLLRNTLLTTILLLFFYQKLSRPITMLITWVNSLNDTQRSPLPLRLTHDDELSELA 221

Query: 318 VNMKTLHERNTEALERIQVISWTDSLTQISNRAHFGVLASAMYERCLQSHRRLALLFLDL 377
              +++ +    A  ++  +++ DSLT ++NR+      S   E    SH    L +LDL
Sbjct: 222 STFQSMWKGKELAESKLNQLAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDL 281

Query: 378 DNFKQVNDQHGHDAGDTLLRIFAQRVRGLLKRHQLDHPQTDVAFARLSGDEFAILLLTDA 437
           D FK +ND  GH  GD L++  A R+    K   L         AR+ GDEFA+L+    
Sbjct: 282 DRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDYLS--------ARIGGDEFAVLI-PYL 332

Query: 438 GDGGVDELCAALLDLCRGGFRLEDRLYPVGVSIGTARYPDDADSITQLLTRADTAMYQAK 497
                +E+   LL L    + ++D  +   VSIG + +P        +L +ADTA+Y+AK
Sbjct: 333 SPAKAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISVFPSVGSCNIDVLRQADTALYRAK 392

Query: 498 AEGKSTAVAFSRELEQRNERIRLIEEQLRALDGDDQLRLVYMPALNREGTVVSCEVLLRW 557
           A G++  + +  E++ + E    IE+ L       QL L Y P ++ +  ++  E L+RW
Sbjct: 393 ASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQLELFYQPQVDEQHNIIGVEALIRW 452

Query: 558 HSPILGTVSPGEFIPIAERAGLHSRIDNWVIDRALTEYPKLVE---LFGAEVILAINVSS 614
           + P  G + PG F+PIAE  G    I NW+I++A  +Y +  +   L      LAIN+S 
Sbjct: 453 NHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQYAQWKKQGILPPHFRRLAINISP 512

Query: 615 AQLADDRICSYLLERAAHHGVAPGRIEIELTETYAAELCAGTMDVVQAIRRAGFRVAIDD 674
            Q A +     +       G+    IE+E+TE+   E     ++ +  ++ +   ++IDD
Sbjct: 513 LQFAQESFIEQVNHALRQAGITGEPIELEITESLLLENVESAIEKMAKLKESQISISIDD 572

Query: 675 FGVGYTSIQQLLEYPADTIKLDMAIITRLTQPDMQQSL-SALVAFCHAQGKRVNAEGVDT 733
           FG GY+S++ L     D +K+D + + +L   D  Q++   ++A        V AEGV+ 
Sbjct: 573 FGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDNDQAIVDTILAIARKLNLEVIAEGVED 632

Query: 734 MDKQSALLQAGCDLFQGYLISPP 756
             + +AL + GC+ FQGYL   P
Sbjct: 633 TSELAALKKLGCNQFQGYLFDKP 655