Pairwise Alignments

Query, 260 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

Subject, 264 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (486), Expect = 1e-53
 Identities = 99/251 (39%), Positives = 148/251 (58%), Gaps = 1/251 (0%)

Query: 7   LLLGGFAGVLAGLFGVGGGLIIVPVLVFSFSAQGFSADILTHLAVGTSLATIVFTSINSI 66
           + LG F G +AGL G+GGG+I VPVL+F     G   + LTH+A+ TSLA I+ T  +S 
Sbjct: 9   IALGAFIGFMAGLLGIGGGVIAVPVLLFLLPMAGVVPEHLTHVAIATSLAAIILTGASSA 68

Query: 67  LTHHRKGAVRWPTVLWMTFGILVGAALGSLTAAAIQGPMLQKIIGVFALAMAVQMGFDLR 126
             HH +G + W  +  M  G++VGA      ++     +L+++   F + MA+QM F  +
Sbjct: 69  RAHHARGNIPWHLLTIMLPGLIVGALSAGFISSLFSAQLLKQVFAGFLVLMALQMVFPFK 128

Query: 127 PKATGRA-PGRPELSLVGVVIGWASAIFGIGGGSLSVPYLTWRSVPMQQAVATSAACGLP 185
                R+ P  P L +  + +   +A+ GIGGG L +P+LTW  V M+ A+  S+  GL 
Sbjct: 129 AAEGERSLPASPYLFVTAMFVAIIAALMGIGGGILFIPFLTWCGVQMRHAIGFSSVTGLM 188

Query: 186 IAIAGALSFMVVGWHETQLPDWSLGFVYLPAMLGIAATSMFFARLGAKLAHRLSAKVLKR 245
           IA+ G+LS++  GW    LP+++LG++YLPA+ GI  TSM  A LGAK A       LK+
Sbjct: 189 IALFGSLSYVFAGWATQGLPEYTLGYIYLPALFGIVCTSMLTAPLGAKAASVWPTARLKK 248

Query: 246 LFALLLLSVGI 256
           +FA++L   GI
Sbjct: 249 IFAVMLFFTGI 259