Pairwise Alignments

Query, 295 a.a., Branched-chain amino acid ABC-type transport system, permease components from Pseudomonas stutzeri RCH2

Subject, 287 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  156 bits (394), Expect = 6e-43
 Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 8/293 (2%)

Query: 1   MTTIFDVPIQAFLGQLLIGLINGSFYAMLSLGLAIIFGMLKIINFAHGAQYMIGAFAGYL 60
           M TIF + + A        L  G+   ++S+GL++  G+++++N AHGA  MIG +    
Sbjct: 1   MQTIFSIAVDA--------LAYGTVLFVISIGLSVTLGLMRVVNLAHGAFAMIGGYIASY 52

Query: 61  LLATLGIGYWPALILAPIIVGLCSAVIERLALSRLYNLDHLYSLLFTFGLALALEGAFRY 120
               LG+GY  A+++A     + +  IERL   R+Y    L  +L T G+   + G   Y
Sbjct: 53  AARDLGLGYGAAVLIAVFGTIVIAIPIERLLYRRIYGQPELTQVLMTIGITFCIIGIANY 112

Query: 121 FYGSSGQPYAVPKELAGGYNLGFMFLPKYRAWVVLASLVICIASWLLIEKTKLGAYLRAA 180
            +G + +   +P  L G  +LGF  +  +R + ++  L +  A W  IEKT  G  LRAA
Sbjct: 113 VFGPTLKTIPLPPSLEGSADLGFRSIAVHRIFAIVCGLAVAGALWFAIEKTAFGVKLRAA 172

Query: 181 TENPTLVRTFGINVPLLLTFTYGMGAALAGLAGMLAAPIYQVSPLMGSNLIIVVFAVVVV 240
            +N  +    G+   ++   ++ +   LA   G++ A +  V P      ++    VV V
Sbjct: 173 VDNAAMAAALGVRTEVVYAVSFAVAVGLAAFGGVVGAELLPVEPYYALRYMVTFLVVVSV 232

Query: 241 GGMGSILGAIITGYMLGILEGLTKVFYPEASNIVIFVIMAIVLLVRPAGLMGR 293
           GG GSI GA+    +LG ++   +   PE      ++ +  ++ V P GL GR
Sbjct: 233 GGAGSIPGALAACLLLGGIDTTGRYLMPEFGEFFFYLAVIAIVCVFPRGLAGR 285