Pairwise Alignments

Query, 295 a.a., Branched-chain amino acid ABC-type transport system, permease components from Pseudomonas stutzeri RCH2

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  152 bits (383), Expect = 2e-41
 Identities = 94/284 (33%), Positives = 155/284 (54%), Gaps = 16/284 (5%)

Query: 19  GLINGSFYAMLSLGLAIIFGMLKIINFAHGAQYMIGAFAGYLLLATLGIGY-----WP-- 71
           GL  GS   + ++GLAI FG++ IIN AHG   M+GA+  +L+   +   +     W   
Sbjct: 248 GLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTTFLVQDVVRTSFPHLFEWSLA 307

Query: 72  -ALILAPIIVGLCSAVIERLALSRLYNLDHLYSLLFTFGLALALEGAFRYFYGSSGQPYA 130
            AL LA ++ G     +ER  +  LY    L +LL T+G++L L+   R  +G + +   
Sbjct: 308 IALPLAFLVTGAVGLALERGVIRFLYGRP-LETLLATWGISLILQQTVRTIFGPTNREVG 366

Query: 131 VPKELAGGYNLGFMFLPKYRAWVVLASLVICIASWLLIEKTKLGAYLRAATENPTLVRTF 190
            P  ++G + LG + +   R W+++ +L +  A   L++KT +G  +RA T+N  +  + 
Sbjct: 367 NPSWMSGAFELGGLAITWNRLWIIVFALAVFAALLFLLKKTPMGLQMRAVTQNRRMASSM 426

Query: 191 GINVPLLLTFTYGMGAALAGLAGMLAAPIYQVSPLMGSNLIIVVFAVVVVGGMGSILGAI 250
           GI  P +   T+ +G+ +AG+AG+  + I  VSP +G   II  F VVV GG+G++ G +
Sbjct: 427 GIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTL 486

Query: 251 ITGYMLGILEGLTKVFYPEASNIV--IFVIMAIVLLV--RPAGL 290
           +  + LGI   L K   P A  ++  I V++ I+L +  RP GL
Sbjct: 487 VGAFSLGI---LNKFLEPYAGAVLGKILVLVLIILFIQKRPRGL 527