Pairwise Alignments

Query, 358 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

Subject, 335 a.a., transcriptional activator FtrA from Pseudomonas fluorescens FW300-N2E2

 Score =  120 bits (300), Expect = 7e-32
 Identities = 96/301 (31%), Positives = 136/301 (45%), Gaps = 14/301 (4%)

Query: 58  IVSRDGRSLRVYNDIPVHPHTSLDDAPPTDVVIVSNLAVSPWEPLDDRYAPEA--QWLCE 115
           +V+ D   +R +  + +     L+       +IV     S  EP      PEA  Q L +
Sbjct: 37  VVAVDQGPMRAFGGLQIGVDAGLEALETARTIIVPGWR-SRQEP-----PPEALLQALRK 90

Query: 116 RYAAGATLAAACSGAMLLARTGLLAGCEGTSHWGYCDCLRREYPDVHWHPDKALVSTGVG 175
            +A GA L + CSG  +LA TGLL G   T+HW +   L   YP ++  P+   V  G  
Sbjct: 91  AHARGARLLSICSGVFVLAATGLLDGETATTHWQFAQELAEHYPLINVDPNVLYVDAG-- 148

Query: 176 QRLVMSGSGSSWHALGLFLIARFVGAREAMEVARMNLFDWDATSPLAYAAMMRTGQLADP 235
           Q +  +GS +   A  L LIAR  G   A  VAR  +     T   A   +    +    
Sbjct: 149 QLITSAGSAAGIDAC-LHLIARDCGTHVANSVARRLVMAPQRTGGQAQFIVAPVSKSPRN 207

Query: 236 VIARCQEWAAQHYEEEAPVSAMVRISGLPERTFQRRFALATGLTPLDYIHTLRLEEAKQL 295
            ++   +W  ++ ++   V  M     + ERTF RRF   TGL P  ++   RL  A++L
Sbjct: 208 ELSGVLQWIRENLDQSPSVGDMAARVAMSERTFLRRFIETTGLAPKAWLQQERLNRAREL 267

Query: 296 LESGELSVEAIAWEVGYQDAGFFGRLFRRKVGLTPAQYRRRFGVLSRRLAGIATLQQAAP 355
           LES +    +IA   GY+    F   FR  VGL P+ YR RFG   RR A      +A P
Sbjct: 268 LESTDQHTASIAQACGYRSVESFRAAFRNAVGLPPSTYRERFG---RREASPQAALKANP 324

Query: 356 A 356
           A
Sbjct: 325 A 325