Pairwise Alignments

Query, 657 a.a., ATP-dependent Zn proteases from Pseudomonas stutzeri RCH2

Subject, 637 a.a., ATP-dependent zinc metalloprotease FtsH from Phaeobacter inhibens DSM 17395

 Score =  311 bits (798), Expect = 4e-89
 Identities = 204/627 (32%), Positives = 322/627 (51%), Gaps = 40/627 (6%)

Query: 47  AMLGELQSSRESWEANRGDLSRLMGDLRGGAIASAALGAEAV-YVTTTGEQRYWVPDQSG 105
           A+      S  + ++     S  +  +  G +++  L  E V Y T+ G+    +     
Sbjct: 19  ALFNLFSGSGSTMQSREKTFSDFVSAVENGNVSTVTLDGEQVRYTTSDGQNFMTIKPGDA 78

Query: 106 RVAALLLDQYAVSGAELFPLAMFQTDAEKPFYKYLLPYSPIALLLIGAAIFFAMKTRGFD 165
            V  LL+D      AE    + FQ+     F   LLP+    LLLIG  I+F  + +G  
Sbjct: 79  EVTTLLIDNNIPVRAEKQQQSGFQS-----FLLTLLPF----LLLIGVWIYFMNRMQGGG 129

Query: 166 --------------VQRKGSGVTFADVIGAAEAKQALSDVTAYLRDPAAYARLGARPPKG 211
                         +  K   VTF DV G  EAK+ L ++  +LR+P  ++RLG + PKG
Sbjct: 130 KGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKG 189

Query: 212 VLLTGEPGTGKTQLAKALASESNASFIQVTGSDFSSMYFGVGIQKVKSLFRTARKQAPCI 271
            LL G PGTGKT LA+A+A E+   F  ++GSDF  M+ GVG  +V+ +F  A+K APCI
Sbjct: 190 ALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCI 249

Query: 272 IFIDEIDGIGK-RAEQTRSSDAESNRIINQFLAEMDGFDGAAGVLVLGATNFPNSLDPAL 330
           +FIDEID +G+ R       + E  + +NQ L EMDGF+   GV++L ATN  + LDPAL
Sbjct: 250 VFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPAL 309

Query: 331 VREGRFDRSIAVGLPGLDDREALFRLYAGKITAAADLDFPQLARNTVGLTPAAIAYIVNH 390
           +R GRFDR++ VG P +  RE +  ++A K     D+D   +AR T G + A +A +VN 
Sbjct: 310 LRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNE 369

Query: 391 AALLAARAGAKQVDMAHFVDAVETCRIGEQPSGVTPMSPTDRKRIAVHEAGHALVAAALN 450
           AAL+AAR G + V M  F  A +   +G +   +  ++   +++ A HE+GHA+V  AL 
Sbjct: 370 AALMAARVGRRFVTMEDFESAKDKVMMGAERRSMV-LTQDQKEKTAYHESGHAVVGMALP 428

Query: 451 V-GRVEKVTILPRGQALGVTLVTPVEDKRLHMYSELRNRIQMLLAGRGAEQLYFHE--VS 507
           +   V K TI+PRG ALG+ +  P  D+  +   E + ++ M +AG+ AE + + E  VS
Sbjct: 429 LCDPVYKATIIPRGGALGMVVSLPEMDRLNYHRDECQQKLAMTMAGKAAEVIKYGEDHVS 488

Query: 508 SGAGQDLQEASKIALSMVGALGMGPRGSLLSLQAVRDAH--------LDSDPREALE-AA 558
           +G   D+Q+AS++A +MV   GM  +   +      + +        + ++ +E +E   
Sbjct: 489 NGPAGDIQQASQLARAMVLRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSANTKELIEDEV 548

Query: 559 DELLQQLNQECLALLQRLKPALDHITERLLAVETVPGEEVLAAIERLPVQ--HHEASVSS 616
              +QQ   + L +L+      + + + LL  ET+ G+E+   ++  P Q    E   + 
Sbjct: 549 KRFIQQGYDQALQILKDKNEEWERLAQGLLEYETLTGDEIKRVMKGEPPQAGEDEGDDAD 608

Query: 617 IIGHALNSIDRVAASAMDSTDSFELSP 643
             G ++ +I +       S D     P
Sbjct: 609 TGGASVTAIPKAKPKKSTSDDGMAPEP 635