Pairwise Alignments

Query, 657 a.a., ATP-dependent Zn proteases from Pseudomonas stutzeri RCH2

Subject, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

 Score =  174 bits (440), Expect = 9e-48
 Identities = 93/242 (38%), Positives = 144/242 (59%), Gaps = 3/242 (1%)

Query: 173 VTFADVIGAAEAKQALSDVTAY-LRDPAAYARLGARPPKGVLLTGEPGTGKTQLAKALAS 231
           ++F D+ G     + + +V    L++P  + ++G  PPKGVLL G PGTGKT LAKA+A 
Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAY 204

Query: 232 ESNASFIQVTGSDFSSMYFGVGIQKVKSLFRTARKQAPCIIFIDEIDGI-GKRAEQTRSS 290
           E+NASF++V GS+    + G G + V+ +F+ A++++PCIIFIDEID +  KR E     
Sbjct: 205 ETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGG 264

Query: 291 DAESNRIINQFLAEMDGFDGAAGVLVLGATNFPNSLDPALVREGRFDRSIAVGLPGLDDR 350
           D E  R + Q LAEMDGFD    V ++ ATN P+ LDPA++R GRFDR I + +P  D R
Sbjct: 265 DREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGR 324

Query: 351 EALFRLYAGKITAAADLDFPQLARNTVGLTPAAIAYIVNHAALLAARAGAKQVDMAHFVD 410
             + +++  K+     +D  ++A+    +  A +  +   A + A R   + + M  F +
Sbjct: 325 LEILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFRE 383

Query: 411 AV 412
           A+
Sbjct: 384 AI 385