Pairwise Alignments

Query, 657 a.a., ATP-dependent Zn proteases from Pseudomonas stutzeri RCH2

Subject, 371 a.a., AAA family ATPase from Methanococcus maripaludis JJ

 Score =  125 bits (313), Expect = 4e-33
 Identities = 76/243 (31%), Positives = 121/243 (49%), Gaps = 10/243 (4%)

Query: 174 TFADVIGAAEAKQALSDVTAYLRDPAAYARLGARPPKGVLLTGEPGTGKTQLAKALASES 233
           TF +V+G  +AK+    V  YL +P  +   G   PK +L  G PGTGKT LA+ALA+E+
Sbjct: 124 TFEEVVGQLDAKKKCKIVIKYLENPELF---GEWAPKNILFYGPPGTGKTMLARALATET 180

Query: 234 NASFIQVTGSDFSSMYFGVGIQKVKSLFRTARKQAPCIIFIDEIDGIGKRAEQTRSSDAE 293
           +     +  ++    + G G ++++SL+  A +  P IIFIDE+D I   + Q +S   +
Sbjct: 181 DVPLYLIKATELIGDHVGDGSKQIESLYENASENTPSIIFIDELDAIA-LSRQFQSLRGD 239

Query: 294 SNRIINQFLAEMDGFDGAAGVLVLGATNFPNSLDPALVREGRFDRSIAVGLPGLDDREAL 353
            + ++N  L E+DG     GV+ + ATN P  LD A+    RF+  I   +P  ++R  +
Sbjct: 240 VSEVVNALLTELDGIKNNLGVVTIAATNNPEMLDNAI--RSRFEEEIEFKMPDDNERLKI 297

Query: 354 FRLYAGKITAAADLDFPQLARNTVGLTPAAI----AYIVNHAALLAARAGAKQVDMAHFV 409
             LY  K+  A + D  +    T G+    I         H A+L  R    Q D+   +
Sbjct: 298 IELYVEKMPIAVNADLKKYVEKTKGMNGRTIKEKFLKPALHKAILEDRESITQKDLDEII 357

Query: 410 DAV 412
             +
Sbjct: 358 KKI 360