Pairwise Alignments

Query, 702 a.a., (p)ppGpp synthetase, RelA/SpoT family from Pseudomonas stutzeri RCH2

Subject, 715 a.a., (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA (NCBI) from Rhodospirillum rubrum S1H

 Score =  508 bits (1308), Expect = e-148
 Identities = 277/714 (38%), Positives = 411/714 (57%), Gaps = 27/714 (3%)

Query: 7   LADRLSTYLGPDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSL 66
           L +R+  Y      +L+ RAY YA + H  Q R SG+ Y +HP+ VA IL    +D  S+
Sbjct: 9   LVERVKAYDPNANEDLLNRAYVYAMKMHGSQLRASGDPYFSHPIDVAGILTRYKLDCASI 68

Query: 67  MAAMLHDVIEDTGIPKEALVAQFGETVAELVDGVSKLTQMNFETKAEAQAENFQKMAMAM 126
           + A+LHD IEDT    E +   FG  VA LVDGV+KLT++   +    QAENF+K+ +AM
Sbjct: 69  ITALLHDTIEDTEATLEDVRQLFGNDVARLVDGVTKLTRIQISSDHAKQAENFRKLLLAM 128

Query: 127 ARDIRVILVKLADRLHNMRTLEVLAG-EKRRRIAKETLEIYAPIANRLGMHTMRVEFEDL 185
           + DIRV++VKLADRLHNMRTL  +   EKR RIA ET+EIYAP+A R+GM  ++ E EDL
Sbjct: 129 SEDIRVLMVKLADRLHNMRTLHFIRKPEKRARIALETMEIYAPLAERIGMAEIKEELEDL 188

Query: 186 GFKAMHPMRSERIRAAVRRARGNRNEIVEKIEQSLIHCLEREGLDGEVLGREKHLYSIYK 245
            F+ ++P   E I A +   R     +V K+   L   L   GL  E+ GREK  YSI++
Sbjct: 189 AFRELYPDAKEGIEARLTFLREQGGTLVPKVIDQLKAALAEHGLTAEITGREKTPYSIWQ 248

Query: 246 KMRGKRKAFHEIMDVYAFRIVVDKADTCYRVLGAVHSLYKPLPGRFKDYIAIPKANGYQS 305
           KM+ K  +F ++ D+ AFRI V+  + CY+ LG +H+ Y  +P RFKDYI+ PK NGYQS
Sbjct: 249 KMKRKNISFEQLSDIMAFRITVENLEQCYQALGIIHASYPMIPDRFKDYISTPKRNGYQS 308

Query: 306 LHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSPEDEVPKGTHARARQWVKGVLE 365
           +HT + G   + IEIQIRT EM  +A  G+AAHW YK     +      R  +W++ +LE
Sbjct: 309 IHTAVIGPERLRIEIQIRTAEMHSVAELGVAAHWSYKQGSPVM----DGRQYRWIRELLE 364

Query: 366 LQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMEMPKGSTAVDFAYAVHTDVGNTCIAC 425
           + +   +  EF+E  K+++F D+V+ FTPKG ++ +P G+T VDFAYAVHT VG+ C++ 
Sbjct: 365 ILEHTSSPEEFLEHTKLEMFSDQVFCFTPKGDLIGLPSGATPVDFAYAVHTQVGDRCVSA 424

Query: 426 RVNRRLAPLSQPLESGSTVEIVTAPGARPNPAWLNFVVTGKARTHIRHALKLQRRSESIN 485
           +VN RL PL  PL +G  VEI T+    P+P W  FVVTGKAR  IR  ++ QRR + + 
Sbjct: 425 KVNGRLVPLRTPLHNGDQVEIATSKAQTPSPEWERFVVTGKARAQIRKFVRSQRRDQYLI 484

Query: 486 LGERLLSKALSGFETSLEKISPERIQQVLTEYHMEYVEDLLEDIGLGNRMAYVIARRLIL 545
           LG +LL +A   F+    +++ + +  VL ++  + VEDL+ D+G G   A  +  + + 
Sbjct: 485 LGRQLLERA---FKAENYEMTEKGLDGVLKKFRADSVEDLIVDVGEGQLPAREVV-QAVY 540

Query: 546 RDDEQAPALEGPLAIRGTE-----------------GLVLNYAKCCTPIPGDPIVGHLSA 588
              +  P L   + +  T+                 G+ L++AKCC  +PGD IVG ++ 
Sbjct: 541 PGLKMVPKLAAVVTLGRTKKPRASDDHSFKIKGMIPGMALHFAKCCHSLPGDRIVGIVTT 600

Query: 589 GKGMVVHLETCRNIADVRHNPDKCIQLSWSKDVTGEFNV-ELRVELEHQRGLIALLAGSV 647
           GKG+ +H   C  +      P++ + L+W  +   + +V  + V + ++ G +  L   +
Sbjct: 601 GKGITIHTIDCDQLEQFSDEPERWLDLAWDAEADSQVHVGRVNVVVANEPGSLGALTTVI 660

Query: 648 NAADGNIEKIGMDERDGRISVVQLVVSVHDRVHLARVIKKLRAIKGVTRITRVK 701
               GNI  + +  R      + + V V D  HL  +I  LRA   +  + R +
Sbjct: 661 AKNLGNITNLKITNRQQDFFDMIVDVEVKDVRHLTNIIAALRATSAINYVERAR 714