Pairwise Alignments

Query, 657 a.a., choline/carnitine/betaine transport from Pseudomonas stutzeri RCH2

Subject, 664 a.a., BCCT transporter from Pseudomonas syringae pv. syringae B728a

 Score =  620 bits (1600), Expect = 0.0
 Identities = 310/666 (46%), Positives = 436/666 (65%), Gaps = 11/666 (1%)

Query: 1   MEAKQPSSS---HLNAPVFYGSAVIILALVIYSVAFQSHAQTLFGDTQAWIIANVSWLYI 57
           M +   SSS    +NAPVFY +A  IL   I  +AF   +       Q W    V W Y+
Sbjct: 1   MSSASSSSSGMVRMNAPVFYFAASFILIFGIVVIAFPQASGEWLLAAQNWAANTVGWYYM 60

Query: 58  LAVALILLMVVLLAFSRYGDIKLGPDHSEPDYSALTWFAMLFSAGMGIGLMFFGVAEPVM 117
           + + L L+ VV+ A S +G IKLG DH EP++S L+W  MLF+AG+ I L FF V+EP+ 
Sbjct: 61  MVMTLYLVFVVVTALSGFGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLT 120

Query: 118 HFLSPPTGEGGTTLAAREAMKITFFHWGLHAWSIYAIVAMILAYFAYRHGLPLTLRSALY 177
           H L PP GEGGT  AAR+ M++ F HWGLH W ++A V M LAYFAYRH LPL LRSALY
Sbjct: 121 HLLQPPQGEGGTAEAARQGMQLLFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALY 180

Query: 178 PLIGERIYGPIGHAVDIFAIIGTVLGVATSLGLGVTQINTGLNHLYGLPISVPVQIGLII 237
           PLIG+RI GPIG+AVD F II T+ G+   +G GV  +N+GL++L+G+  +  +Q+GLI 
Sbjct: 181 PLIGKRINGPIGYAVDGFGIIATIFGLGADMGFGVLHLNSGLDYLFGVAHTHWIQVGLIT 240

Query: 238 ATTLLATVSVVTGLDKGVRRLSELNLTLAALLLLMVLVAGPTVFILQTFVQNTGSYLSDI 297
                A +  + G+DKGVR +S++N+ LA  LLL VL AGPT  +L T VQN G YL  +
Sbjct: 241 LMMGAAILVAIAGVDKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLVQNIGDYLGAL 300

Query: 298 VDKTFNLYAY-EPNDWIGGWTLFYWGWWLAWSPFVGLFIARISRGRTIREFVAGVLLVPT 356
             K+F++YAY EP+DW+GGWT+FYW WW+AW+PFVGLFIARISRGRTIREFV GVLL+P 
Sbjct: 301 PSKSFDVYAYNEPSDWLGGWTVFYWAWWIAWAPFVGLFIARISRGRTIREFVFGVLLIPL 360

Query: 357 AFTLLWMTVFGDTAIHMILWEHVTSLGDAIEQDSSLALFAFLEHFPFSALISLIAIIMVV 416
            FTL WM++FG++AI  +L   +T+LG +   D S+ L+  LE +P+S  +  + + +  
Sbjct: 361 GFTLAWMSIFGNSAIDQVLNHGMTALGQSAIDDPSMTLYLLLETYPWSKTVIAVTVFISF 420

Query: 417 VFFVTSADSGALVVDMLASGG---KQGTPVWQRIFWAMSMGGVAIALLLADGLTALQTAT 473
           VFFVTSADSG +V+  L++ G    +  P W R+FW ++   +   LL +  + AL++A 
Sbjct: 421 VFFVTSADSGTVVLSTLSAKGGNPDEDGPKWLRVFWGVATALITSGLLFSGSIDALKSAV 480

Query: 474 IASALPFTIALLCSMWGLLKALRLDATKQGLRYQALSTSPSAPRTAGGWQRRLRTLMLFP 533
           + ++LPF++ LL  MWGL KA  +++ ++    Q  S +P +    GGW++RL   + +P
Sbjct: 481 VLTSLPFSLILLLMMWGLHKAFVMESQRK--IAQLYSLAPVSGSRRGGWRQRLSQAVHYP 538

Query: 534 RRAHVVRFITEVVRPAYEDIAEEMRKQGY-VVEISEGEDRRLRFEITHDGEPDFIYEVRP 592
            R  V RF+ + VRPA E++     ++G  VV + +  +  +  EI H  E  FIY+V+ 
Sbjct: 539 SRDEVYRFLDQTVRPAIEEVTAVFVEKGLNVVNVPDPSNDSVTLEIGHGEERPFIYQVQM 598

Query: 593 RAYAMPSFV-ATSDDDEREERKYFRAEVHLKEGGQDYDVMGWSREDVISDILGQYEKHMH 651
           + +  PSF        +   R+Y+RAEVHL EG QDYD++G+++E VI+D+L QYE+HM 
Sbjct: 599 KGFFTPSFARGGMGSKQLNNRRYYRAEVHLSEGSQDYDLVGYTKEQVINDVLDQYERHMQ 658

Query: 652 FLHMVR 657
           FLH+VR
Sbjct: 659 FLHLVR 664