Pairwise Alignments

Query, 657 a.a., choline/carnitine/betaine transport from Pseudomonas stutzeri RCH2

Subject, 519 a.a., BCCT transporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  247 bits (631), Expect = 8e-70
 Identities = 150/481 (31%), Positives = 243/481 (50%), Gaps = 13/481 (2%)

Query: 24  LALVIYSVAFQSHAQTLFGDTQAWIIANVSWLYILAVALILLMVVLLAFSRYGDIKLGPD 83
           +AL      F     +   DT     A    LY   + L   ++ L+     G   L   
Sbjct: 27  IALFCAYALFDIEGLSALVDTSFAFSAKYFGLYWQVLLLATFLIGLVLCFLPGSRTLMGG 86

Query: 84  HSEPDYSALTWFAMLFSAGMGIGLMFFGVAEPVMHFLSPPTG----EGGTTLAAREAMKI 139
            S P++   +W AM+    +  G +F+   EP+ HFLS P       G     A  A+  
Sbjct: 87  LSTPEFGTFSWAAMIMCTLLAGGGVFWAAGEPIAHFLSTPPVFGDLSGDVQAQAHAALAQ 146

Query: 140 TFFHWGLHAWSIY-AIVAMILAYFAYRHGLPLTLRSALYPLIGER-IYGPIGHAVDIFAI 197
           +F HWG  AW+I  ++  ++L ++ Y  GLPL  R+ LYPL+G+R + GPIG   D   I
Sbjct: 147 SFLHWGFLAWAILGSLTTVMLMHYHYDKGLPLAPRTLLYPLLGDRALSGPIGLIADASCI 206

Query: 198 IGTVLGVATSLGLGVTQINTGLNHLYGLPISVPVQIGLIIATTLLATVSVVTGLDKGVRR 257
           I  V G    +G    Q++ GLN L G+P +   Q   I+A   L TVS +TGL KG++ 
Sbjct: 207 IAVVAGTVGPIGFLGLQMSYGLNDLTGIPDTFATQAIAILALVGLYTVSAITGLAKGIKI 266

Query: 258 LSELNLTLAALLLLMVLVAGPTVFILQTFVQNTGSYLSDIVDKTF---NLYAYEPNDWIG 314
           LS++N+ LA +LL+ +LVAGPT+ I   F      Y +   D      +   +    W+G
Sbjct: 267 LSQINVLLAVVLLIFMLVAGPTMNIFAGFFGGMQVYATHFFDMAMYRGDAGLFGDAGWLG 326

Query: 315 GWTLFYWGWWLAWSPFVGLFIARISRGRTIREFVAGVLLVPTAFTLLWMTVFGDTAIHMI 374
            WT+F+WGW++ + P + +FIARISRGR+IR+ +  + +     T  W T+ G + I   
Sbjct: 327 WWTVFFWGWFMGYGPLMAVFIARISRGRSIRQIIITLSIAAPLITNFWFTIIGGSGIFFE 386

Query: 375 LWEHVTSLGDAIEQDSSLALFAFLEHFPFSALISLIAIIMVVVFFVTSADSGALVVDMLA 434
           + E     G     +    L A  +  P   ++S++ +++ + F  T++DS + V+    
Sbjct: 387 IAEPGVVSGPFEGFNLPAGLLAITQAMPMGLILSVLFLVLTMCFVATTSDSMSYVISSTM 446

Query: 435 SGGKQGTPVWQRIFWAMSMGGVAIALLLA--DGLTALQTATIASALPFTIALLCSMWGLL 492
           + G+  T +  R FW ++MG +A+ L+     G+  LQ+  + +A+P ++ LL S+W  L
Sbjct: 447 TDGEPSTAM--RAFWGLAMGVMALILISTGEGGIGKLQSFIVVTAVPVSLILLPSLWDAL 504

Query: 493 K 493
           +
Sbjct: 505 R 505