Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Pseudomonas stutzeri RCH2

Subject, 280 a.a., Diaminopimelate epimerase (NCBI) from Rhodospirillum rubrum S1H

 Score =  204 bits (520), Expect = 1e-57
 Identities = 116/269 (43%), Positives = 154/269 (57%), Gaps = 5/269 (1%)

Query: 5   FTKMHGLGNDFMVIDLVSQHAHIQPKHAKQWGDRHTGVGFDQLLIVEPPQNPDVDFRYRI 64
           F KMHGLGNDF+VID  ++   + P+  +   DRH+GVG DQ + +EP +   V F   +
Sbjct: 8   FLKMHGLGNDFIVIDARTRPLDLTPERVRALADRHSGVGCDQFVTIEPARGGGVAFM-GL 66

Query: 65  FNSDGSEVEQCGNGARCFARFVVDKRLTVKRKIKVETKGGIIELDIRPDGQIRVDMGPPR 124
            N+DG  VE CGN +RC  R ++++R      + +ET GG++E        I VDMGP R
Sbjct: 67  RNADGEIVESCGNASRCVGRLLLEEREA--ESVLIETLGGMVEARRASGELIEVDMGPAR 124

Query: 125 LVPAEIPFQAEQEALCYPLEVDGQRVELAAVSMGNPHAVLRVDSVEQAPVHELGPKIEHH 184
           L   EIP     + L   L V G   +  AVSMGNPHAV  VD  +   +   GP IEHH
Sbjct: 125 LTWQEIPLAGAADTLHIELSV-GPLSDPCAVSMGNPHAVFFVDDADAIDLATWGPLIEHH 183

Query: 185 PRFPQRVNVGFLQIVDRRQARLRVWERGAGETQACGTGACAAAVAAIRQGWM-DSPVQID 243
             FP R NV  + +    + R+RVWERG G T+ACGTGACA+AVAA+R+G +     ++ 
Sbjct: 184 GLFPNRTNVEAVHLRADGRLRMRVWERGVGITRACGTGACASAVAAMRRGLIAGRTAEVV 243

Query: 244 LPGGRLSIEWAGPGQPVMMTGPAVRVFEG 272
           L GG L I W      V+MTG A   + G
Sbjct: 244 LDGGTLGIVWRESDGHVLMTGSATLAYSG 272