Pairwise Alignments

Query, 809 a.a., penicillin-binding protein, 1A family from Pseudomonas stutzeri RCH2

Subject, 625 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  183 bits (465), Expect = 2e-50
 Identities = 109/321 (33%), Positives = 161/321 (50%), Gaps = 43/321 (13%)

Query: 421 QAALVSLDPQDGSIEALAGGFSFGQSNYNRAIQAKRQPGSSFKPFIYSAALDAG-YTAAS 479
           + ALV++DP+   I+A+ GG  +  S YNR  QA+RQPGS+FKPF++ AAL  G Y   S
Sbjct: 340 EMALVAIDPRTHFIKAMVGGVDYRTSQYNRVTQARRQPGSAFKPFVFYAALATGKYRPNS 399

Query: 480 LVNDSPIVFVEQGMDRIWRPKNDNNTFLGPIRMREALYKSRNLVSIRLLQTMGIDHTVDY 539
            + D+P+ +  Q     + P+N + +F G + +  AL +SRN+ ++RL QT+G+D  ++ 
Sbjct: 400 SIADTPVTY--QLGAETYSPQNYDRSFAGNMSLTSALAQSRNIPAVRLGQTVGLDRVIEI 457

Query: 540 ISRFGFNLQDLPRNLSLALGTATLTPMEIATGWTTFANGGYKIEPYLIQRIEDREGNLVF 599
             R G +    P  +SL LG   +TP+E+   + T A+GG+   P LI ++ D +G  + 
Sbjct: 458 CRRIGISSPMQP-VVSLPLGAIGVTPLELTNAYATLASGGWYAPPTLILQVRDSQGRRLL 516

Query: 600 EANPARVPPPDDQPAAAVADTFAAPPSRALDTDESTDAGPRYAEQVLDERTAYIMTSMLQ 659
           +  P   P P+ Q  A                                      +  M+Q
Sbjct: 517 DHTPR--PQPELQSKAVAQ-----------------------------------LNQMMQ 539

Query: 660 DVIKRGTGRRALAMGRNDIAGKTGTTNDSIDSWFSGYNADIVTTVWAGFDQPQSLGRNEY 719
            V+  GTGR   A     +AGKTGTT+D  D WF GY  D+  +VW G D    +G    
Sbjct: 540 AVVTSGTGR--AAQFNRPVAGKTGTTSDERDIWFVGYTPDLAASVWLGNDDNSKIGGGAT 597

Query: 720 GGTVALPIWMTFMSAVLKDMP 740
           GG +A PIW  FM   L   P
Sbjct: 598 GGAIAAPIWREFMQQALAQQP 618



 Score =  172 bits (437), Expect = 4e-47
 Identities = 113/341 (33%), Positives = 185/341 (54%), Gaps = 16/341 (4%)

Query: 9   WSCFAVFCALLLSISGAFLYLSPNLPSVDSLRSIQLQIPLR---VYSADDKLIAEF-GEM 64
           W    V+ +  ++I GA L L+ +  ++  +R ++  +P +   +Y  + +LIA    E 
Sbjct: 18  WPLRLVYGSSAIAI-GAVLGLALSFRNLPDVRLLRRYVPSQTTYIYDINGELIAALHDEA 76

Query: 65  RRSPIRFEDIPQEFIQALLAAEDDNFANHYGVDITGLMRAATQLLKSGQIQTGGSTITMQ 124
            R  +    I  +  Q++LA ED NF +H G++  G+ RA      SG +  GGST+TMQ
Sbjct: 77  NRETVPLNQISPKLQQSVLAIEDSNFYDHPGINPIGIGRAIVANFSSGGVVEGGSTLTMQ 136

Query: 125 VAKNYFLTSERSFSRKINEILLALQIERELSKNEILELYVNKIYLGNRAYGIEAASQVYY 184
           + KN FLT +R+F RK++E +LAL++E+ +SK+ ILELY+N++Y G   YG+E AS+ Y+
Sbjct: 137 LVKNLFLTPDRNFGRKLSEAVLALRLEQVISKDRILELYLNQVYWGRNLYGVEMASRSYF 196

Query: 185 GKSISELSVAQLAMIAGLPKAPSAFNPV-----VNP---ARSKERRDWILGRMFRLGSLD 236
            KS + L  A+ + +AGL  AP  + P      ++P    R+KER+  +L R+  +G L 
Sbjct: 197 NKSAANLDWAEASFLAGLIAAPEFYTPFDERDRLSPQRLERAKERQRLVLQRLVEIGQLS 256

Query: 237 ESSYRQALAEPETARYHGAAPELDASYIAEMARAEMVGRFG-SAAYTDGFRVQTTVSSER 295
            S+   A AEP       +     A Y+++    E+  +FG SA    G RVQTT+    
Sbjct: 257 PSAASAAAAEPLKFGEISSFRPSSAPYVSDAVIQELAQQFGRSAVVQGGLRVQTTIDLRM 316

Query: 296 QVAANNALNSGLIEYDQRHGYRGPEARLADV-PRENWAQEL 335
           Q  A   +     + ++R G R  E  L  + PR ++ + +
Sbjct: 317 QRLAEKVIQEN-YQRNRRAGLRADEMALVAIDPRTHFIKAM 356