Pairwise Alignments

Query, 513 a.a., Type II secretory pathway, component ExeA (predicted ATPase) from Pseudomonas stutzeri RCH2

Subject, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 23/253 (9%)

Query: 10  FLNHYGFSHDPFAARVPGFKFFPAQRKPVLGQLHHLARYSQL--LLLVTGPEGSGKTLLR 67
           +LN +GF   PF+  VP  ++    ++     +H  A         ++TG  G+GKT + 
Sbjct: 2   YLNFFGFDELPFSI-VPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60

Query: 68  QALVASSNKQSVQSVVITPQGTMDASALLSQIAQA--LSSPAADFDGIMTQVTQLALT-- 123
           +A++AS   ++   +++ P  T     LL  I     +S P       +TQV    L   
Sbjct: 61  RAILASLPGKTRAGMILNP--TFSDLELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAE 118

Query: 124 ---GQEVYLLVDDAECLTGAAVETLLRLAAGSPEARP--HVFLFGEPALAGRL------E 172
              G +V L++D+A+ L    +E L  L     E+     V L G+P L  +L      +
Sbjct: 119 HAQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQ 178

Query: 173 ALSEGEERYHAIALQPYEEDETREYLALRLEGAGSGIECLNEEQIVRVHEQSGGWPGAIN 232
                  RYH   L P  E++T +Y+  R+E A    E  N +    + EQ+ G P  IN
Sbjct: 179 LAQRITGRYH---LLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLIN 235

Query: 233 QMARDELLAAMQS 245
            +    L  A Q+
Sbjct: 236 LVCDAALKQAYQA 248