Pairwise Alignments

Query, 323 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

Subject, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (357), Expect = 1e-38
 Identities = 78/293 (26%), Positives = 143/293 (48%), Gaps = 1/293 (0%)

Query: 24  AMTLKIAEIHPAGYPTVVAMENLGKKLETATNGEIKSRMFAGGVLGSEKEVIEQTQIGAV 83
           A TLK+      G     + + L   LE  + GEIK  ++    LG ++ +++Q  +G +
Sbjct: 23  ATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDL 82

Query: 84  QLTRVSLGSVGPVVPATNVFNMPFVFRDIDHMRKVVDGEIGQEILDAITNSDFNMVGLAW 143
            +T    G +G  +P      +P+V +D DH+R++ + + GQ + D +    FN   L  
Sbjct: 83  DITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQK-FNWRALDT 141

Query: 144 MEAGSRSLYTKKPIRRIEDLKGMKIRVIGNPLFIDTLNAMGANGIAMDTGEIFSALQSGV 203
              G+R   + +P+  IED KG+K+RV      ++     GA+   M   E++ ALQ+  
Sbjct: 142 WYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNA 201

Query: 204 IDGAENNSPTLLEHNHFRVAKHYTQTHHLILPEPLLMSKDTWNKLSPEQQATVKKLAKEA 263
           +DG EN  PT+     + V K+   THH++  + +++S+ TW KLS   +  ++K  ++ 
Sbjct: 202 VDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKV 261

Query: 264 QLEERDLWVAKETASNEKLKAEGVEFIEVDTKPFYDATAPVREKYGAQFAELI 316
                     +E       K+EG+     D +PF +A  P+ +++ +   + I
Sbjct: 262 GDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPI 314