Pairwise Alignments

Query, 323 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

Subject, 341 a.a., TRAP dicarboxylate transporter- DctP subunit from Pseudomonas syringae pv. syringae B728a

 Score =  444 bits (1142), Expect = e-129
 Identities = 221/327 (67%), Positives = 263/327 (80%), Gaps = 4/327 (1%)

Query: 1   MNLKRKLLVTALPFAFCISGLAHA-MTLKIAEIHPAGYPTVVAMENLGKKLETATNGEIK 59
           M+ KRKLL+ ALP AFC+SG+A A + +K AE+HPAGY  VVA +N+GKKLE  + GEI 
Sbjct: 1   MDFKRKLLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEIS 60

Query: 60  SRMFAGGVLGSEKEVIEQTQIGAVQLTRVSLGSVGPVVPATNVFNMPFVFRDIDHMRKVV 119
            +M+AGGVLGSEKEV+EQ Q GAVQ+TRVSLG VGPVVP  NVFN+PFVF D  HMR ++
Sbjct: 61  FKMYAGGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTII 120

Query: 120 DGEIGQEILDAITNSDFNMVGLAWMEAGSRSLYTKKPIRRIEDLKGMKIRVIGNPLFIDT 179
           DG+IGQEILD ITNS+FNMV LAWM+ G+R+LYTKKP+R+I DLKGMKIRV GNP+FI+T
Sbjct: 121 DGQIGQEILDKITNSEFNMVALAWMDGGTRNLYTKKPVRQISDLKGMKIRVQGNPVFIET 180

Query: 180 LNAMGANGIAMDTGEIFSALQSGVIDGAENNSPTLLEHNHFRVAKHYTQTHHLILPEPLL 239
           +N MG NGIAM TGEIFSALQ+GVIDGAENN PT  +HNH++ AK +T T HLILPEP++
Sbjct: 181 INDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIV 240

Query: 240 MSKDTWNKLSPEQQATVKKLAKEAQLEERDLWVAKETASNEKLKAEGVEFIEV---DTKP 296
           MSK TW KL+PEQQA VKKLA+EAQ+EER LW      +  KLKA GVEFI +     K 
Sbjct: 241 MSKTTWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKA 300

Query: 297 FYDATAPVREKYGAQFAELIKRIEAVQ 323
           FYDAT PVR+KYGA++  LI RI AVQ
Sbjct: 301 FYDATQPVRDKYGAKYKGLIDRIGAVQ 327