Pairwise Alignments

Query, 515 a.a., Uncharacterized conserved protein from Pseudomonas stutzeri RCH2

Subject, 508 a.a., ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) from Shewanella oneidensis MR-1

 Score =  720 bits (1859), Expect = 0.0
 Identities = 343/504 (68%), Positives = 407/504 (80%), Gaps = 4/504 (0%)

Query: 3   RQPISTGSEWTFDLIRQYDREIGRIAERYALDTYPNQIEVITAEQMMDAYASVGMPLGYH 62
           R  +S G +W+F+L++ Y +EI R+A  Y L+ YPNQIE+ITAEQMMDAYA +GMP+GY 
Sbjct: 9   RIALSDGPDWSFELLQSYLKEIERVAAIYKLNAYPNQIEIITAEQMMDAYAGIGMPIGYT 68

Query: 63  HWSYGKQFLHTEKHYKRGQMGLAYEIVINSDPCIAYLMEENTMCMQALVIAHASYGHNSF 122
           HWS+GK+F+ TE+ YKRGQMGLAYEIVINS+PCIAYLMEENT+ MQALV+AHA +GHNSF
Sbjct: 69  HWSFGKRFIETEQGYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACFGHNSF 128

Query: 123 FKGNYLFRTWTDASSIIDYLVFAKQYIMQCEERHGIDAVEDLLDSCHALMNYGVDRYKRP 182
           FK NYLF+TWTDASSIIDYLVFAK YI  CE+++GI+ VE ++DSCHALMNYGVDRYKRP
Sbjct: 129 FKNNYLFKTWTDASSIIDYLVFAKNYISDCEQKYGIEQVESVIDSCHALMNYGVDRYKRP 188

Query: 183 YPISAEEERRRQKDREEHLQRQINDLWRTIPKGADKGDGQADSQRFPAEPQENILYFIEK 242
             IS  EE+ RQKDRE +LQ Q+NDLWRTIP    +       +RFPAEPQENILYFIEK
Sbjct: 189 AEISFREEQARQKDREAYLQSQVNDLWRTIPTHQQQ-QPSTTKRRFPAEPQENILYFIEK 247

Query: 243 HAPLLEPWQREVVRIVRKIAQYFYPQRQTQVMNEGWATFWHYTLLNDLYDEGLVTDGFMM 302
           +APLLEPWQRE++RIVRK+AQYFYPQ+QTQVMNEGWATFWHYT+LN LYD+G+V+D FMM
Sbjct: 248 NAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVSDRFMM 307

Query: 303 EFLQSHTSVIYQPGFDSPYYSGINPYTLGFAMYQDIRRICEHPTEEDKRWFPDIAGSDWL 362
           EFLQSHT V+ QP ++S YYSGINPY LGFAM+ DIRRICE PT+ED+ WFPDIAGS+WL
Sbjct: 308 EFLQSHTGVVAQPEYNSRYYSGINPYALGFAMFTDIRRICEAPTDEDRIWFPDIAGSNWL 367

Query: 363 TTVKFAMNNFKDESFILQFLSPKVIRDLKLFSILDDDRKDELLVPAIHDESGYHTIRELL 422
            T+ FAM NFKDESFI Q+LSP+VIR  KLF I DD++++ L V AIHDE GY  IR LL
Sbjct: 368 DTLHFAMQNFKDESFISQYLSPRVIRQFKLFGIHDDEKRNYLSVSAIHDEQGYQDIRNLL 427

Query: 423 AAQYNLGNREPNVQVWNVDRRGDRSLTLRHTQHDRKPLGGSTEEVLKHLHRLWGFDVHLQ 482
           + QYNL N EPN+QV NV+  GDRSLTLR+  +   PL GS  EVLKHLHRLWGF V L+
Sbjct: 428 SQQYNLSNIEPNIQVHNVEINGDRSLTLRYVPNKDIPLAGSYNEVLKHLHRLWGFSVSLE 487

Query: 483 SIQDDKLVNTHHMPPRPSSEPEAD 506
            +  D  V      P    +P+AD
Sbjct: 488 QVNADNSVTLLSKCP---EQPKAD 508