Pairwise Alignments

Query, 426 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

Subject, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  273 bits (697), Expect = 1e-77
 Identities = 157/417 (37%), Positives = 230/417 (55%), Gaps = 7/417 (1%)

Query: 13  LILLRVPVAYSL---GLATLVGAWWIDIPLHAVMIQIAGGVNKFSLLAIPFFVLAGAIMA 69
           L+   +PV +SL    LA L+      I   A   Q+ GG++ F+LLA+PFFVL G +M 
Sbjct: 11  LLFAGMPVGFSLIFVALAFLILTNSTGINFAAQ--QMLGGIDNFTLLAVPFFVLTGHLMN 68

Query: 70  EGGMARRLVAFAGVLVGFVRGGLSLVNITASTFFGAISGSSLADTASVGSVLIPEMEKKG 129
             G+  R+  FA  LVG + G L  VNI AS  F  +SGS+LAD   +G + I  M    
Sbjct: 69  SAGITERIFNFAKSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAK 128

Query: 130 YPREFSTAVTISGSVQALLTPPSHNSVIYSLAAGGTVSIAALFVAGIGPGLLLSATMATL 189
           Y  +F+  +T +  +   L PPS   VIY + +    SI ALF+AG  PGLL    +  +
Sbjct: 129 YHDDFAGGLTAASCIIGPLVPPSVPLVIYGVVSN--TSIGALFLAGAIPGLLCCIALMVM 186

Query: 190 CLLFARKRNYPKGEVVPLRQALKICVEALWGLMTMVIILGGILSGVFTATESAAVAVVWA 249
                +KR Y        R+  K   EA   L+T VII+GGI SG FT TE+AAV+ ++A
Sbjct: 187 SYFICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAAVSSLYA 246

Query: 250 FFVTMFIYRDYKWSELPRMLHRTVRTLSIVMILIAFAASFGYIMTLMQIPSKITTAFLAL 309
            F+   +Y          +L  TV T ++V +++     FG+I+   Q+P  +   FL +
Sbjct: 247 LFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTI 306

Query: 310 SDNRYVILMCINFMLLVLGTLMDMAPLILILTPILLPVVVSFGVDPVHFGMIMLVNLGIG 369
           SDN  V+L+ IN +LL LGT ++   L+L+L P L+PV  + G+DPVHFG++ ++NL IG
Sbjct: 307 SDNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIG 366

Query: 370 LITPPVGAVLFVGAAIGKVTIENTVKALLPFYAALFAVLMAVTYIPMISLWLPSVVL 426
           ++TPP+G  L+V + +G +      + +LP    LF VL  V   P  +L LP + L
Sbjct: 367 ILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVPLFIVLALVAVFPQFTLLLPELFL 423