Pairwise Alignments

Query, 426 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

Subject, 437 a.a., large C4-dicarboxylate uptake permease, DedA family protein from Sinorhizobium meliloti 1021

 Score =  279 bits (713), Expect = 1e-79
 Identities = 149/421 (35%), Positives = 246/421 (58%), Gaps = 10/421 (2%)

Query: 11  IVLILLRVPVAYSLGLATLVGAWWID----IPLHAVMIQIAGGVNKFSLLAIPFFVLAGA 66
           +VL LL  P+ +++ +     A+++     IPL     ++A G    SLLA+P FVLAG 
Sbjct: 14  VVLFLLSTPITWAMAIGAF--AFFLINMDMIPLANFAQEMAEGSQSVSLLALPLFVLAGC 71

Query: 67  IMAEGGMARRLVAFAGVLVGFVRGGLSLVNITASTFFGAISGSSLADTASVGSVLIPEME 126
           IM   G+ RRL+A A VLVG + G L+ +     T  G ++ S+ AD A +   L  EM 
Sbjct: 72  IMNASGITRRLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVEMS 131

Query: 127 KKGYPREFSTAVTISGSVQALLTPPSHNSVIYSLAAGGTVSIAALFVAGIGPGLLLSATM 186
           ++GY R F+  +T S ++   L PPS   ++Y   A    SI  LF AG+ PGL+L+  +
Sbjct: 132 QRGYSRAFAAVITSSAAIITSLIPPSIGLIVYGFLA--ETSIGRLFAAGVIPGLVLATGL 189

Query: 187 ATLCLLFARKRNYP--KGEVVPLRQALKICVEALWGLMTMVIILGGILSGVFTATESAAV 244
                  ARKR Y   + E     + ++  ++ LW L   V+I  G   G+FT TE+ AV
Sbjct: 190 MVTTYFIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVIFAGTRYGLFTTTEAGAV 249

Query: 245 AVVWAFFVTMFIYRDYKWSELPRMLHRTVRTLSIVMILIAFAASFGYIMTLMQIPSKITT 304
            VV+  FV +F YR++ + ++P +L   VR  ++VMI+I  AA+FG+ +   Q+P  ++ 
Sbjct: 250 VVVYVLFVAVFGYREFTFRQIPEVLAEAVRDSAVVMIMICAAAAFGFYLAWEQVPQAMSG 309

Query: 305 AFLALSDNRYVILMCINFMLLVLGTLMDMAPLILILTPILLPVVVSFGVDPVHFGMIMLV 364
                +DN  ++L+ IN +L+V+GT ++ +  ++ILTP+L+P++   G+D VHFG++ + 
Sbjct: 310 WLGEATDNPLLMLLLINVLLIVIGTAIEGSAALIILTPMLIPIIDGVGIDRVHFGVVFIT 369

Query: 365 NLGIGLITPPVGAVLFVGAAIGKVTIENTVKALLPFYAALFAVLMAVTYIPMISLWLPSV 424
           NL I  ITPPVG ++++ + + KV +    + +LP+ A +  +L+ ++  P +SLWLP++
Sbjct: 370 NLTIAGITPPVGGLMYISSMVLKVPMMAYAREVLPYLAMMMVILVMLSMFPQLSLWLPNL 429

Query: 425 V 425
           V
Sbjct: 430 V 430