Pairwise Alignments

Query, 426 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

Subject, 426 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  284 bits (726), Expect = 4e-81
 Identities = 151/418 (36%), Positives = 253/418 (60%), Gaps = 7/418 (1%)

Query: 1   MDAVVLLGSFIVLILLRVPVAYSL---GLATLVGAWWIDIPLHAVMIQIAGGVNKFSLLA 57
           M   + LG+ +  + L VP+A++L   G+A ++     D  +  V   +  G + F L+A
Sbjct: 1   MTISIFLGALLGPMALGVPIAFALILSGVALMLYLGLFDAQI--VAQNVLNGADSFPLMA 58

Query: 58  IPFFVLAGAIMAEGGMARRLVAFAGVLVGFVRGGLSLVNITASTFFGAISGSSLADTASV 117
           +PFF+LAG +M  GG++RR+VA A  +VG +RGGL  V I A+    ++SGS++AD A++
Sbjct: 59  VPFFLLAGEVMNTGGLSRRIVALAMAMVGHIRGGLGFVAIFAACILSSLSGSAVADAAAL 118

Query: 118 GSVLIPEMEKKGYPREFSTAVTISGSVQALLTPPSHNSVIYSLAAGGTVSIAALFVAGIG 177
           G++L+P M K G+    ++ +  S S+   + PPS   +++ +  G  VSI  LF+AGI 
Sbjct: 119 GALLLPMMLKSGHDPARASGLIASASIIGPIIPPSIGFILFGVVGG--VSITKLFLAGIF 176

Query: 178 PGLLLSATMATLCLLFARKRNYPKGEVVPLRQALKICVEALWGLMTMVIILGGILSGVFT 237
           PGL+++A ++   L+ ARK  +        R  L+  V++LW L   VII+ G+  GVFT
Sbjct: 177 PGLMIAAALSITWLIVARKEQFELPPRQSGRLRLRAFVDSLWALFLPVIIIAGLKFGVFT 236

Query: 238 ATESAAVAVVWAFFVTMFIYRDYKWSELPRMLHRTVRTLSIVMILIAFAASFGYIMTLMQ 297
            TE+  +A V++ FV+M +YR+   ++L  +     +  ++VM L+A AA   +++T+  
Sbjct: 237 PTEAGVIAAVYSLFVSMVVYRELAPAQLFHVFVSAAKISAVVMFLVACAAVSAWLITVAD 296

Query: 298 IPSKITTAFLALSDNRYVILMCINFMLLVLGTLMDMAPLILILTPILLPVVVSFGVDPVH 357
           +P  +      L  N+  +L+ I  +++++GT MDM P ILI+TP+L+PV+   G+DPV+
Sbjct: 297 VPGALAALLEPLMGNQTALLIAIMVLIVIVGTAMDMTPTILIMTPVLMPVIKQAGIDPVY 356

Query: 358 FGMIMLVNLGIGLITPPVGAVLFVGAAIGKVTIENTVKALLPFYAALFAVLMAVTYIP 415
           FG++ ++N  IGLITPPVG VL V   + K+++E+ +K ++PF  A   VL  +   P
Sbjct: 357 FGVLFIINNSIGLITPPVGTVLNVICGVSKLSMEDLMKGVMPFLFAELIVLFLLVLFP 414