Pairwise Alignments

Query, 426 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

Subject, 427 a.a., TRAP dicarboxylate transporter, DctM subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  309 bits (792), Expect = 9e-89
 Identities = 155/423 (36%), Positives = 253/423 (59%), Gaps = 3/423 (0%)

Query: 1   MDAVVLLGSFIVLILLRVPVAYSLGLATLVGAWWID-IPLHAVMIQIAGGVNKFSLLAIP 59
           M A+++    + L+L  +P++ SLGL  L   + +  +P+ +V +++  G+ KF ++AIP
Sbjct: 1   MSALIIFTLLLCLMLTGMPISISLGLTVLTFLFTMTTVPIESVALKLFTGIEKFEIMAIP 60

Query: 60  FFVLAGAIMAEGGMARRLVAFAGVLVGFVRGGLSLVNITASTFFGAISGSSLADTASVGS 119
           FF+LAG  +  GG+A+R++ FA  +VG   GGL L  + A   F AISGSS A   ++GS
Sbjct: 61  FFILAGNFLTHGGVAKRMINFATAMVGHWYGGLGLGGVVACALFAAISGSSPATVVAIGS 120

Query: 120 VLIPEMEKKGYPREFSTAVTISGSVQALLTPPSHNSVIYSLAAGGTVSIAALFVAGIGPG 179
           +L+P M K+G+PR F   V  +     +L PPS   V+Y++A     S+ ALF+AG+ PG
Sbjct: 121 ILLPAMVKQGFPRRFGAGVITTSGALGILIPPSLVMVMYAVATN--TSVGALFMAGVVPG 178

Query: 180 LLLSATMATLCLLFARKRNYPKGEVVPLRQALKICVEALWGLMTMVIILGGILSGVFTAT 239
           L+L+  +     + ARK NYP+          K   EA+WGLM +VI++GGI SG+FT T
Sbjct: 179 LVLATLLGVTTSVIARKNNYPRLPKASWATRAKAFREAIWGLMLVVIVIGGIYSGIFTPT 238

Query: 240 ESAAVAVVWAFFVTMFIYRDYKWSELPRMLHRTVRTLSIVMILIAFAASFGYIMTLMQIP 299
           E+AA++ V+AF + +F+Y+D     + ++L  +    ++++ +I  A  F +++    IP
Sbjct: 239 EAAAMSAVYAFLIAVFVYKDMPLRGVVKILLSSASMSAMLLYIITNAVLFSFVLANENIP 298

Query: 300 SKITTAFLALSDNRYVILMCINFMLLVLGTLMDMAPLILILTPILLPVVVSFGVDPVHFG 359
             I    +         L+ +N +LL  G  M+ + ++LI+ PIL PV +  G+DPVHFG
Sbjct: 299 QAIADWIVGKELGIVAFLLVVNVLLLAAGNFMEPSSIVLIMAPILFPVAMKLGIDPVHFG 358

Query: 360 MIMLVNLGIGLITPPVGAVLFVGAAIGKVTIENTVKALLPFYAALFAVLMAVTYIPMISL 419
           ++++VN+ +G+  PPVG  L+V + I K+ I     A++P+   +   L+ VTY P +SL
Sbjct: 359 ILIIVNMEVGMCHPPVGLNLYVASGITKMGISELTVAVMPWLLTMLGFLIVVTYWPGLSL 418

Query: 420 WLP 422
           WLP
Sbjct: 419 WLP 421