Pairwise Alignments

Query, 805 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 381 a.a., histidine kinase from Cupriavidus basilensis FW507-4G11

 Score =  160 bits (406), Expect = 9e-44
 Identities = 119/358 (33%), Positives = 193/358 (53%), Gaps = 17/358 (4%)

Query: 441 QESEARLKAMAGNVPGLVFRLERDGPQAPVRVAYISEASQRLVGYSAERLLQPGQGIRSL 500
           Q+SEARL A+  +    +  ++        R+   +  ++RL GY+A ++   G+ +  L
Sbjct: 18  QDSEARLAAIIRSSMEAIITVDETQ-----RIVLFNPTAERLFGYTAAQVA--GRPLADL 70

Query: 501 VHADDEAGYWAS-QQLALEKSQDWRW-QGRILNR-NGEVRWADIRASVRGQPDGR-QVWD 556
           + A     + A  ++  +    D +  Q R+L+    +     I AS+    DG  +++ 
Sbjct: 71  IPARFRVAHEAHVRRFGVTGVTDRQMGQQRVLHALRQDGTEFPIEASISQTQDGAGRLFT 130

Query: 557 GIVWDITDNKRIELELDASRAQLRELAAHLETVREEEKAHIAREVHDELGQVLTVLKLET 616
            I+ D T+  R E  L  SR +L++L+  ++  REEE+  IARE+HD+LGQ L+ LK++ 
Sbjct: 131 VILRDTTERVRAETALRQSREELQQLSDRVQASREEERRRIARELHDDLGQRLSALKMDL 190

Query: 617 SM--CELGFADLDPALAQRLESMKRLIAQLFQRVRDVATALRPPILD-AGIASAVEWQAR 673
           ++   +L  A   PAL  +  +M  +I +    VR +A  LRP +LD  G+  A+EW A+
Sbjct: 191 AILASDLKDAGTAPALLDQAAAMHLVIDETVASVRRIAADLRPALLDELGLIPAIEWLAK 250

Query: 674 RFEERSGVACLVEVPECPPALGNAKAIGLFRILQESLTNVMRHARAQTVSVQLQLEGDLL 733
            F  R GV  ++   E    +G   A  +FRI+QE+L+NV++HA+A  V ++L  + D  
Sbjct: 251 EFSARYGVNVIIHAAE-EEDVGEHAATAVFRIVQEALSNVVQHAQADRVDIELVRQDDHF 309

Query: 734 CLRVSDDGCGFADAGRSAGS--SFGLVGMRERIQMLGGQLCIDSQPGEGTTITARVPL 789
            L V D+G G A    + G   S GLVG+RER ++LGG +     PGEG  +T R PL
Sbjct: 310 ELTVRDNGRGDAATQPAGGERVSLGLVGIRERARLLGGTVATRQAPGEGFCLTVRFPL 367



 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 7/160 (4%)

Query: 301 RLKTARRDIE--LREAAEEAQRLTQFCLDHSTVGILWLNWDSRVRYANQAAEVLLGHSSG 358
           RL+  RR  E  L    +   RL    +  S   I+ ++   R+   N  AE L G+++ 
Sbjct: 2   RLRRPRRAGEGNLPHTQDSEARLAAI-IRSSMEAIITVDETQRIVLFNPTAERLFGYTAA 60

Query: 359 GLLDQPLERFDPALGMDAWLARWRA-ARTGEDDRQVHE---CEWLRADGQRFPAAVTYSF 414
            +  +PL    PA    A  A  R    TG  DRQ+ +      LR DG  FP   + S 
Sbjct: 61  QVAGRPLADLIPARFRVAHEAHVRRFGVTGVTDRQMGQQRVLHALRQDGTEFPIEASISQ 120

Query: 415 LRFGSREYLVVFLADITERRRASAQLQESEARLKAMAGNV 454
            + G+     V L D TER RA   L++S   L+ ++  V
Sbjct: 121 TQDGAGRLFTVILRDTTERVRAETALRQSREELQQLSDRV 160