Pairwise Alignments

Query, 343 a.a., Spermidine/putrescine-binding periplasmic protein from Pseudomonas stutzeri RCH2

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 70/315 (22%), Positives = 128/315 (40%), Gaps = 31/315 (9%)

Query: 1   MSNYLKLSALALGLVCAGQATANSLTAVSFGGANKQAQVKAFYQPWEAAGHGRIVAGEYN 60
           M  ++K   L+  +  +      +L   ++GG   +  +KAF Q  E             
Sbjct: 1   MKTFIKGLVLSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQ-EGVTINYSTFENNE 59

Query: 61  GEMAKVKAMVDTNSVSWNLVEVESPELSRGCDEGLFEELDPSIVGNSDDFVEGAIQPCGV 120
               K+K +  T    +++V   +  + +   EGL  E+D + + N  D +     P  +
Sbjct: 60  SMYTKLKLLKGTG---YDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAM-----PTVL 111

Query: 121 GF-----------FVWS-TVLAYNADKLKSAPASWADFWDTEKFPGKRGLRKGAKYTLEF 168
           G            ++W  T L YN+  L +    WAD WD +++  +  L    +     
Sbjct: 112 GLAHDPQNKFSLPYIWGITGLYYNSSTLPNGITKWADLWD-KQYEQQVMLIDDIRDVFGM 170

Query: 169 ALMADGVPVKDVYKVLATKDGQNRAFRKLDQLKPNIQWWEAGAQPPQFLASGDVVMSSAY 228
           AL  +G  +         ++   +A+  L  LK N+  + + A    ++ SG+  +   +
Sbjct: 171 ALKLNGFSINT-----KNEEEIKKAYESLVALKKNVLLYNSDAPHVPYV-SGEATLGMQW 224

Query: 229 NGRIAAVQNES-NLQIVW--SGGIYDFDSWAIPKGAKSQEQARKFIAFTVEPQQQKAYAE 285
           NG     Q E   L+ V    G +   D++ IP G+K+   A KFI F  +P+ Q    +
Sbjct: 225 NGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQ 284

Query: 286 NIAYGPANTQAVSLL 300
           ++ Y  A     +LL
Sbjct: 285 SLGYASATKGGRALL 299