Pairwise Alignments

Query, 343 a.a., Spermidine/putrescine-binding periplasmic protein from Pseudomonas stutzeri RCH2

Subject, 340 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 50.1 bits (118), Expect = 8e-11
 Identities = 72/310 (23%), Positives = 123/310 (39%), Gaps = 52/310 (16%)

Query: 7   LSALALGLVCAGQATANSLTA-VSFGGANKQAQVKAFYQPWEAAGHGRI--VAGEYNGEM 63
           ++  A+    AG A A      V+  G + QA  +A  Q +E   + RI  V G     +
Sbjct: 7   IAGAAISASWAGMAVAEDCALRVTTWGGSYQATYQAVAQKFEEEHNCRIEWVVGASPDHL 66

Query: 64  AKVK-AMVD--TNSVSWNLVEVESPELSRGCDEGLFEELDPSIVGNSDDFVEGAIQ-PCG 119
            K +   VD  TN++  ++          G  EGL+++LDP+ + N  +    A+  P  
Sbjct: 67  IKARLGQVDVVTNTLLNSIA---------GEKEGLWQKLDPAKIPNMANLYPNAVHSPYT 117

Query: 120 VGFFVWSTVLAYNADKLKSAPASWADFWDTEKFPGKRGLRKGAKYTLEFALMA-DGVPVK 178
           V   V   VLAYN D + + PA+W + W  E             Y     +   D +P  
Sbjct: 118 VFANVGDYVLAYNKDTVTTVPATWDELWKPE-------------YKNRVVIYGIDHIPTL 164

Query: 179 DVYKVLATKDGQNRAFRKLDQLKPNIQWW-------------EAGAQPPQFLASGDVVMS 225
            +  + A K+G +     +D ++P +                +  +Q      +GD  + 
Sbjct: 165 SLTVLQAEKNGGS-----IDNVEPGLDRMAELIKSGNLIGSLDVESQMVSLFETGDAWLG 219

Query: 226 SAYNGRIAAVQNE--SNLQIV--WSGGIYDFDSWAIPKGAKSQEQARKFIAFTVEPQQQK 281
               GR+  + ++  +N+  V    G      S  I K AK+   A  F+ + +  + Q 
Sbjct: 220 MLATGRMKELLSKGVTNVSFVRPEEGTFPLITSVNIHKDAKNPAMAAAFVNYILSSEVQV 279

Query: 282 AYAENIAYGP 291
           A+A    Y P
Sbjct: 280 AFATRNLYAP 289