Pairwise Alignments

Query, 417 a.a., ABC-type spermidine/putrescine transport system, permease component I from Pseudomonas stutzeri RCH2

Subject, 293 a.a., putrescine transport system permease protein PotH from Phaeobacter inhibens DSM 17395

 Score =  166 bits (421), Expect = 6e-46
 Identities = 87/214 (40%), Positives = 135/214 (63%), Gaps = 4/214 (1%)

Query: 194 VYLDIFARTFWMGLVITVICLLLAYPLAYLLANLPARQSNLLMILVLLPFWTSILVRVAA 253
           +Y   +  +  + +V TV+ LL+ YP+AY +A  P+     LM+LV+LPFWTS L+RV A
Sbjct: 70  LYWKAYLSSLRIAVVSTVLTLLVGYPMAYGMARAPSEWRPTLMMLVILPFWTSFLIRVYA 129

Query: 254 WIVLLQSGGLINGALLKMGLIDEPLQLVFNRTGVYIAMVHILLPFMILPIYSVMKNISPS 313
           W+ +L + GL+N  L+  GLID PL ++   T VYI +V+  LPFMILPIYS ++ +  S
Sbjct: 130 WMGILSNEGLLNQFLIWAGLIDTPLTILNTNTAVYIGIVYTYLPFMILPIYSALERLDGS 189

Query: 314 YMRAAVSLGCHPFASFWRVYFPQTLAGVGAGCLLVFIISIGYYITPALLGSPNDQMVS-- 371
            + AA  LGC    +FW V  P + AG+ AGC LVFI ++G ++ P+LLG  +  M+   
Sbjct: 190 LIEAAEDLGCSRMEAFWLVTIPLSRAGIIAGCFLVFIPTLGEFVIPSLLGGSDTLMIGKV 249

Query: 372 YFVAFYTNTTINWGMATALGGLLLLATMLLYVIY 405
            +  F++N   +W +A+A+  +LLL  ++  V++
Sbjct: 250 LWEEFFSNR--DWPVASAVAVVLLLILIVPIVLF 281