Pairwise Alignments

Query, 417 a.a., ABC-type spermidine/putrescine transport system, permease component I from Pseudomonas stutzeri RCH2

Subject, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  168 bits (425), Expect = 2e-46
 Identities = 81/217 (37%), Positives = 137/217 (63%), Gaps = 4/217 (1%)

Query: 191 DQAVYLDIFARTFWMGLVITVICLLLAYPLAYLLANLPARQSNLLMILVLLPFWTSILVR 250
           D  +Y   +  +  M LV T+ CL++ YP+AY +A  PAR   +L++LV+LP WTS L+R
Sbjct: 75  DDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAIARAPARWQTVLLLLVMLPSWTSFLIR 134

Query: 251 VAAWIVLLQSGGLINGALLKMGLIDEPLQLVFNRTGVYIAMVHILLPFMILPIYSVMKNI 310
           V AW+ +L + G+IN +L+ +G+I EPLQ++     VYI +++  LPFMILP+Y+ +  +
Sbjct: 135 VYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYAYLPFMILPLYATLVKL 194

Query: 311 SPSYMRAAVSLGCHPFASFWRVYFPQTLAGVGAGCLLVFIISIGYYITPALLGSPNDQMV 370
             S + AA  LG     +FW++ FP + +GV AG +LVFI ++G ++ P LLG P+  M+
Sbjct: 195 DMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVGEFVIPELLGGPDSLMI 254

Query: 371 S--YFVAFYTNTTINWGMATALGGLLLLATMLLYVIY 405
               +  F+ N   +W +A++L  ++L+  ++   ++
Sbjct: 255 GKVLWQEFFNNR--DWPVASSLAIVMLVLLIIPITLF 289