Pairwise Alignments

Query, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  196 bits (499), Expect = 2e-54
 Identities = 118/355 (33%), Positives = 193/355 (54%), Gaps = 4/355 (1%)

Query: 187 RLGIILSLVLVILVSLGAWLVIRSVMVNIRGVIAS-LQSIARGDGDLTQRVNVESNDEIG 245
           ++GI L ++LV+ + L +W V R +  N  G IA+ L  IA GDGDLT+R++V S DE+G
Sbjct: 288 QIGIGLGILLVMAL-LTSWFVARQL--NELGNIANALADIAEGDGDLTRRLDVRSQDEVG 344

Query: 246 AMIELFNSFLDKLQSTIRQIIDAATPLGQVSKELYKLTQGSEENAKSQQHHTDSITRDIL 305
            + + FN F+D+L   ++ + + +  L Q +         + +  ++QQ     +   + 
Sbjct: 345 LLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVT 404

Query: 306 TMTGSIQEVAQRSQQASDEANSAARQAATAREHVGSLSTGISDLGDSVMGAVKAMEQLEE 365
            M  +  E+A  ++  +  A  + +        +      I  L   + GAV+ + +LE 
Sbjct: 405 EMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEV 464

Query: 366 ETQEVGSVLTVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTAE 425
              E+ ++L+ IR IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+Q+T AST E
Sbjct: 465 HANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEE 524

Query: 426 IQQIIQRLQNSANTVLNVMTSNGEKSRASIQRSIEATQLLETIARTVNQIDELNAGIAQF 485
           IQ  I  LQ    T ++VMT + +    S+    +    L+ I+  + QI ++   IA  
Sbjct: 525 IQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASA 584

Query: 486 TQEQIGLSSSIQQETQVLQQDAQATANGAEATARLGEQLVSTGDHLRAATGQFRV 540
            +EQ  +++ I   T+ +++ +   A  A+ + +  + L +    L     +F++
Sbjct: 585 AEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639