Pairwise Alignments

Query, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (531), Expect = 4e-58
 Identities = 121/353 (34%), Positives = 204/353 (57%), Gaps = 4/353 (1%)

Query: 188 LGIILSLVLVILVSLGAWLVIRSVMVNIRGVIASLQSIARGDGDLTQRVNVESNDEIGAM 247
           +G ++ +V +++V+L A  ++R     IR V   LQ I+ G+GDLTQR+ V S DEIG +
Sbjct: 357 VGTLMVVVGLLVVTLMAMRLVRP----IRAVAERLQDISSGEGDLTQRLQVNSADEIGQL 412

Query: 248 IELFNSFLDKLQSTIRQIIDAATPLGQVSKELYKLTQGSEENAKSQQHHTDSITRDILTM 307
            + FN F+DKLQ  IR+++D    +   ++++    + +  ++++Q    DS+      M
Sbjct: 413 AQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEM 472

Query: 308 TGSIQEVAQRSQQASDEANSAARQAATAREHVGSLSTGISDLGDSVMGAVKAMEQLEEET 367
           T +   V + +Q+A + A+ A R A T  E +      ++ L D +  AV  +E+L    
Sbjct: 473 TQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNN 532

Query: 368 QEVGSVLTVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTAEIQ 427
             +  +L+VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T AS  EI+
Sbjct: 533 TGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIR 592

Query: 428 QIIQRLQNSANTVLNVMTSNGEKSRASIQRSIEATQLLETIARTVNQIDELNAGIAQFTQ 487
            +I +++     V+  +  + E ++A+ ++  +A   L  +   ++ I+E++  I Q  Q
Sbjct: 593 SVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQ 652

Query: 488 EQIGLSSSIQQETQVLQQDAQATANGAEATARLGEQLVSTGDHLRAATGQFRV 540
           +Q  +S+ + Q    ++  +    +  EA+ ++GEQ+       +   GQF+V
Sbjct: 653 DQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705