Pairwise Alignments

Query, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  222 bits (566), Expect = 3e-62
 Identities = 137/348 (39%), Positives = 201/348 (57%), Gaps = 6/348 (1%)

Query: 194 LVLVILVSLGAWLVIRSVMVNIRGVIASLQSIARGDGDLTQRVNVESNDEIGAMIELFNS 253
           LVL++L SL    + RS+       +A+L++IA+G+GDLT+++ V   DE+  + + FN 
Sbjct: 214 LVLIVLASL----IGRSITQPCEETLATLKNIAQGEGDLTRQLTVTGKDELAQIAQAFNL 269

Query: 254 FLDKLQSTIRQIIDAATPLGQVSKELYKLTQGSEENAKSQQHHTDSITRDILTMTGSIQE 313
           F +K++  I++I      +   + EL ++ Q +   A  Q    D++   +  +  S QE
Sbjct: 270 FTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQAVDTVASAMNQLHASNQE 329

Query: 314 VAQRSQQASDEANSAARQAATAREHVGSLSTGISDLGDSVMGAVKAMEQLEEETQEVGSV 373
           VAQ + QA   A+SA + A+  RE +   ST +  L D +    +  + L  ETQ V +V
Sbjct: 330 VAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTRTEQETQVLASETQSVSAV 389

Query: 374 LTVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTAEIQQIIQRL 433
           L VIR +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +T AST EI+QII +L
Sbjct: 390 LEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLATRTQASTNEIEQIIAQL 449

Query: 434 QNSANTVLNVMTSNGEKSRASIQRSIEATQLLETIARTVNQIDELNAGIAQFTQEQIGLS 493
           Q  A +V   MT   ++SR + Q++ +A Q+L  I   +  I   N  IA  + +Q   +
Sbjct: 450 QKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTILSFNQHIAGASAQQSEAT 509

Query: 494 SSIQQE-TQVLQQDAQATANGAEATARLGEQLVSTGDHLRAATGQFRV 540
             I +  TQ+ +   QA+A  A   A   EQL+  G HL  +   F++
Sbjct: 510 DEITRNLTQIAEHSTQASAQ-ANQVAAASEQLMENGQHLARSLAVFKI 556