Pairwise Alignments

Query, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  201 bits (511), Expect = 6e-56
 Identities = 132/432 (30%), Positives = 216/432 (50%), Gaps = 14/432 (3%)

Query: 123 DNALAASTKLIDGSASFDDL------RPSLDRMASDLAQAQKL-------GSDFRAQAYD 169
           +N +A    LID S + D        +P+++  A  L  A+ L       G+       D
Sbjct: 133 ENGVAVIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVD 192

Query: 170 SFQQTLVETREANANTTRLGII-LSLVLVILVSLGAWLVIRSVMVNIRGVIASLQSIARG 228
           +        REA+     +  I LS+V ++   +   +++   +  ++ V++SLQ++A G
Sbjct: 193 TQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAG 252

Query: 229 DGDLTQRVNVESNDEIGAMIELFNSFLDKLQSTIRQIIDAATPLGQVSKELYKLTQGSEE 288
            GDLT R+ VES DEIG + + FN+F+DKL   +  I  +A  +   ++EL + T  +  
Sbjct: 253 GGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASH 312

Query: 289 NAKSQQHHTDSITRDILTMTGSIQEVAQRSQQASDEANSAARQAATAREHVGSLSTGISD 348
                   TD +   +  M+ + +EVA  +   +    SA  Q A A++ V     GI +
Sbjct: 313 KMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGE 372

Query: 349 LGDSVMGAVKAMEQLEEETQEVGSVLTVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVV 408
           L + V     A+  L ++  ++  VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 373 LVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVV 432

Query: 409 ADEVRNLAQKTAASTAEIQQIIQRLQNSANTVLNVMTSNGEKSRASIQRSIEATQLLETI 468
           ADEVR+LA +T  ST EI +++  L    +  +  M  + E+   +   S++  + L  I
Sbjct: 433 ADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGI 492

Query: 469 ARTVNQIDELNAGIAQFTQEQIGLSSSIQQETQVLQQDAQATANGAEATARLGEQLVSTG 528
           ++ V+ I ++    A   ++Q  ++  I Q    +QQ     +   + T  +   L  +G
Sbjct: 493 SKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSG 552

Query: 529 DHLRAATGQFRV 540
             +    G F++
Sbjct: 553 QQMGTLVGHFKL 564