Pairwise Alignments

Query, 235 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

Subject, 234 a.a., ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  127 bits (319), Expect = 2e-34
 Identities = 81/204 (39%), Positives = 118/204 (57%), Gaps = 10/204 (4%)

Query: 21  LLDIPTFRLERGESLFLKGPSGSGKTTLLGLIGGVQKAGRGSIRLLDHDLGRLSAGARDR 80
           +LD   F +  G +L + G SGSGK+TLLGL+ G+     GS+RL   D+  L    R  
Sbjct: 36  ILDGIDFTVAAGTTLAIVGASGSGKSTLLGLLAGLDTPSEGSVRLDGEDIYALDEDGRAL 95

Query: 81  FRVDHTGYIFQQFNLLPFLSVRENVGLPCHFSRLRAERARKRHGSTDAAAASLLEHLGLS 140
            R    G++FQ F LL  L+  ENV LP     LR + AR R  +T+     +L  +GL 
Sbjct: 96  LRKRKLGFVFQSFQLLGHLNALENVMLPLE---LRGD-ARAREKATE-----MLGRVGLG 146

Query: 141 PELFERRADALSIGQQQRVAAARALIGQPELVIADEPTSALDADSREAFLHLLFSECRAA 200
             L +     LS G+QQRVA ARA + +P L++ADEPT +LDA + EA + L+F   R  
Sbjct: 147 SRL-KHSPKYLSGGEQQRVALARAFVTEPPLLLADEPTGSLDAATGEAVIELMFELNRER 205

Query: 201 GASLLFVSHDQSLAPLFDRSLSLA 224
           G++L+ V+HD ++A    R++++A
Sbjct: 206 GSTLVLVTHDNAMAARCQRTITIA 229