Pairwise Alignments

Query, 644 a.a., Predicted signal-transduction protein containing cAMP-binding and CBS domains from Pseudomonas stutzeri RCH2

Subject, 607 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (459), Expect = 8e-50
 Identities = 143/633 (22%), Positives = 271/633 (42%), Gaps = 43/633 (6%)

Query: 24  EFLRKYAPFNQMEPAHLTFLVENCELRFYAEGDCIISPDDGVVQHFYIVKQGRVHGQRPH 83
           +F  +  PFN++       L    ++ ++ + D +I     V  H +I+ +G V  + P 
Sbjct: 4   KFNMQSPPFNRLTAEQQHQLRSALDVAYFRQRDVLIDAQHPVT-HLHILIKGTVEERSPD 62

Query: 84  TAKRGTDTTFEVIVGECFPMAALMGERATRTAHLAAEDTFCFLLNKPAFVKLVSSSPVFR 143
               G +        + F + A+  E  ++  ++A EDT  +LL K  F++L   +  F 
Sbjct: 63  ----GKEVFAHYANDDLFDVRAMF-EELSKHQYMALEDTLSYLLPKSIFLQLYEQNGEFA 117

Query: 144 DFAMRGVSSLLDLVNQQAQMRAVESLGEQYSLETSIGELALHHPVSCLPSRPLNEAVAMM 203
            +    ++   +L+   AQ + +        + T +     H P    P +P++     +
Sbjct: 118 AYFDNNLAKRQELIEAAAQQKNIAEF-----ILTKVDRSIYHPPFILSPEQPIHSVTQQL 172

Query: 204 QQENVGSIVI---------VDEALHPQGIFTLRDLRRAIGTGTTDLSQPISQFMTHDPFY 254
           ++  + + ++              HP  I T  ++  A+      L  P+ +  T    +
Sbjct: 173 KERGIDAALVELHPSDPRLAHNHAHPYAIVTRTNMLHAVMLEGRPLDTPVGEIATFPVLH 232

Query: 255 LPPDATAFDAAIAMTERHIAHVCVVENGLLQGVISERDLFSLQRVDLVHLAQTIRHADRV 314
           +      F+A + MT + I  V V       G++S   + S        L   I  A  +
Sbjct: 233 VDEGDFLFNAMVMMTRQRIKRVMVCLGNQAVGLLSLIQILSAFSTHSHVLTLAIARAASI 292

Query: 315 DALVVIRSRIAQLVDNMLAHGASSTQITHIVTLLNDHTVCRVIELAIEHMGDPGVPFTWL 374
           D L +  ++  +LV+++++ G  +  +  ++  +N+  + +  EL +     P       
Sbjct: 293 DELALAANKQRELVESLMSRGVRTRFVMELIAAVNEQIIEKAFELVV-----PPALHDQC 347

Query: 375 CF---GSEGRQEQTLYTDQDNGILFEAADAAEAAHIRGRLLPLAERINRDLDTCGFSLCK 431
           C    GSEGR EQ L TDQDN ++ +  D  E    +    P+ E +   L   G+ LC 
Sbjct: 348 CLVVLGSEGRGEQILKTDQDNALIIQ--DGLEWHQCQ----PIMETLTHTLLQLGYPLCP 401

Query: 432 GNIMASNPQLCLSRQEWSRRFSSFVREATPENLLGSTIYFDLRSIWGPSEGCEQLRRDLL 491
           G +M +NP+   S+ +W R  + +V+ A PE ++   I+ D  ++ G       ++  L 
Sbjct: 402 GKVMVNNPKWVRSQSDWKRTLTDWVKAARPEQVMDIAIFADAHAVAGNRALLAPVKAHLQ 461

Query: 492 DEIKGNSLFQRMMADNALRHRPPVGRFRDFVVARKGEGKDTLDLKVQGLTPFVDGARLLA 551
             + G  L        AL    P+  F +   +++G     +D+K  G+ P V G R L+
Sbjct: 462 HLMAGQELILAEFTRPALNFSVPLTLFGNVKSSKQG-----IDIKQGGIFPIVHGVRALS 516

Query: 552 LSNDIGTCNTLERLRKLVEKGVIEKKDGAAYEEAYHFIQQTRMQHHQQQARDELPYSNRL 611
           L + I   NT +R+  LV+K V+E++ G    EA+    + R+     Q       +N+L
Sbjct: 517 LEHAIDANNTFDRIEALVKKRVLEQETGDNLSEAFKLFLKLRL----AQQLGNQHSTNQL 572

Query: 612 DPDTLNVLDRRILRESFRQAQRLQASLAVRYQL 644
           D   L+  +R +LR S    ++ +  L   YQ+
Sbjct: 573 DFKQLDRTERDLLRHSLHVVKKFKQWLGYHYQI 605