Pairwise Alignments

Query, 235 a.a., DNA polymerase III, alpha subunit (gram-positive type) from Pseudomonas stutzeri RCH2

Subject, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

 Score = 49.7 bits (117), Expect = 5e-11
 Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 19/179 (10%)

Query: 38  QRLVVLDLETTGL------HLKRDLVIAIGAVVIEDGAIDYSQQFECTLC--RQVKVTES 89
           QR+VVLD ETTG+      H +   +I IGAV I +  +   + F   L   R +++ E+
Sbjct: 10  QRIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLT-GRHFHVYLKPDRDIQL-EA 67

Query: 90  VLIHGIAPSELANGLPPAEALLSFMEFAAGSVILAFHAPFDQRMLG---RALKRELGYTM 146
           + +HGI    L +     +    F++F  G+ ++A +APFD   +      L   +G T 
Sbjct: 68  IEVHGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTS 127

Query: 147 DH-TFLDVADLAPMLFPEAMIHRGGLDHWLDYFNIHIPQR--HNASADAMATAEIALIL 202
           D     D   +A  +FP     R  LD   + + I    R  H A  DA   A++ L++
Sbjct: 128 DFCKVTDTLAMAKRIFPG---KRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLM 183