Pairwise Alignments

Query, 235 a.a., DNA polymerase III, alpha subunit (gram-positive type) from Pseudomonas stutzeri RCH2

Subject, 209 a.a., 3'-5' exonuclease from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 2e-18
 Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 6/166 (3%)

Query: 36  RQQRLVVLDLETTGLHLKRDLVIAIGAVVIEDGAIDYSQQFECTLCRQVKVTE-SVLIHG 94
           R    V LD ETT L  KR  ++ I A  I D  I  SQ FE  LC    +   SV IH 
Sbjct: 26  RHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHR 85

Query: 95  IAPSELANGLPPAEALLSFMEFAAGSVILAFHAPFDQRMLGRALKRELGYTMDHTFLDVA 154
           I   +L +GL   EALL  +EF     ++ +H  +D+ +L  A ++ LG+ + +  ++V+
Sbjct: 86  IRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFPLPNRLIEVS 145

Query: 155 ----DLAPMLFPEAMIHRGGLDHWLDYFNIHIPQRHNASADAMATA 196
               D      P A      L+    + ++ +  +H+A  DA+A A
Sbjct: 146 QIYHDKLEKHLPNAYFDL-SLEAICRHLDLPLQDKHDALQDAIAAA 190