Pairwise Alignments

Query, 235 a.a., DNA polymerase III, alpha subunit (gram-positive type) from Pseudomonas stutzeri RCH2

Subject, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score = 42.7 bits (99), Expect = 6e-09
 Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 15/177 (8%)

Query: 38  QRLVVLDLETTGLHLKRDLV------IAIGAVVIEDGAIDYSQQFECTLCRQVKVTESVL 91
           +R V+LD ETTG++     V      I IG V + +  +      E     Q    E++ 
Sbjct: 8   KRQVILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQAIDEEAIT 67

Query: 92  IHGIAPSELANGLPPAEALLSFMEFAAGSVILAFHAPFDQRMLGRALK----RELGYTMD 147
           +HGI    +A+    A+   +F+EF  G+ I+A +A FD   +         R    T  
Sbjct: 68  VHGITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDI 127

Query: 148 HTFLDVADLAPMLFPEAMIHRGGLDHWLDYFNIHIPQR--HNASADAMATAEIALIL 202
              LD  ++A  L P     +  LD     + I   +R  H A  DA   A++ LI+
Sbjct: 128 CQVLDSLEIAKFLHPG---QKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLIM 181