Pairwise Alignments

Query, 235 a.a., DNA polymerase III, alpha subunit (gram-positive type) from Pseudomonas stutzeri RCH2

Subject, 645 a.a., Conserved hypothetical protein from Mycobacterium tuberculosis H37Rv

 Score = 47.4 bits (111), Expect = 7e-10
 Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 21/200 (10%)

Query: 35  LRQQRLVVLDLETTGLH------LKRDLVIAIGAVVIEDGAIDYSQQFECTLCRQVKVTE 88
           LR+   VV+DLETTG           D +  IGAV +  GA+    +F   +  Q  +  
Sbjct: 38  LRETTFVVVDLETTGGRTTGNDATPPDAITEIGAVKVCGGAV--LGEFATLVNPQHSIPP 95

Query: 89  SVL-IHGIAPSELANGLPPAEALL-SFMEFAAGSVILAFHAPFDQRMLGRALKRELGYTM 146
            ++ + GI  + + N  P  +A+L  F EFA  SV++A +A FD   L  A +R      
Sbjct: 96  QIVRLTGITTAMVGNA-PTIDAVLPMFFEFAGDSVLVAHNAGFDIGFLRAAARR-----C 149

Query: 147 DHTFLDVADLAPMLFPEAMIHRG-----GLDHWLDYFNIHIPQRHNASADAMATAEIALI 201
           D T+     L  M     ++ R       L      F +     H A  DA AT ++   
Sbjct: 150 DITWPQPQVLCTMRLARRVLSRDEAPSVRLAALARLFAVASNPTHRALDDARATVDVLHA 209

Query: 202 LLHRAQRVGLTSLDELAQRL 221
           L+ R    G+ +  EL   L
Sbjct: 210 LIERVGNQGVHTYAELRSYL 229