Pairwise Alignments

Query, 235 a.a., DNA polymerase III, alpha subunit (gram-positive type) from Pseudomonas stutzeri RCH2

Subject, 181 a.a., exonuclease (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 67.8 bits (164), Expect = 1e-16
 Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 4/162 (2%)

Query: 43  LDLETTGLHLKRDLVIAIGAVVIEDGAIDYSQQFECTLCRQVKVTESVLIHGIAPSELAN 102
           +DLE TGL   +D +++IG V IE+GAI  S   +  +  +  V +S +IHGI  + L  
Sbjct: 1   MDLEMTGLDPFKDQILSIGLVPIENGAIPLSHAQQKLVQIRGSVGQSAIIHGILDNHLTQ 60

Query: 103 GLPPAEALLSFMEFAAGSVILAFHAPFDQRMLGRALKRELGYTMDHTFLD--VADLAPML 160
            +   EA+  FME   G V++A H+P D R L + +       +    +D  V +   +L
Sbjct: 61  AVSIEEAMAWFMEQTRGRVLVAHHSPLDCRFLQQDILTIYHQAVLLPAIDTLVLEKQRLL 120

Query: 161 FPEAMIHRGG--LDHWLDYFNIHIPQRHNASADAMATAEIAL 200
              +++  G   L    + + + I   H+A  DA+A AE+ L
Sbjct: 121 REHSVLKEGSLRLGACRERYGLPIYGAHSALTDALACAELLL 162