Pairwise Alignments

Query, 260 a.a., Formamidopyrimidine-DNA glycosylase from Pseudomonas stutzeri RCH2

Subject, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 34/236 (14%)

Query: 32  DMSRLVGQAVRGFHSWGKHFLIELEDVAVRIHLLLFGSYRINERKDATAR---LSLAFAN 88
           ++ +L GQ +   H   K+ +IE    +  +HL + GS RI +     A+   + L   +
Sbjct: 40  ELKQLEGQTILAIHRRAKYLIIETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTS 99

Query: 89  GELNFYACSVQLIEGPLGAAYDWSMDVM--------SDAWSPRTTLKRLRARPRLLACDA 140
           G+   Y    +     L  A D S +V+        ++A++    + + R + R+     
Sbjct: 100 GKRLRYN-DPRRFGAWLWCAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNK-RIAVKAF 157

Query: 141 LLDQTLFAGSGNIIKNEVLYRIRVHPLSLIGELPPAKLRELVREARSYSFEFLEWKQAG- 199
           ++D     G GNI  NE L+  R+HPL     L   + + LV   +      +  KQ G 
Sbjct: 158 IMDNAAVVGVGNIYANESLFTSRLHPLRPAHSLSLEEWQTLVANIKQVLQVAI--KQGGT 215

Query: 200 VLKAHWLAHGKTA---------------CVRCHIPLVKVKELGRSRRRAFFCERCQ 240
            LK    + GK                 C  C  PL + K    ++R  FFC +CQ
Sbjct: 216 TLKDFTQSDGKPGYFAQELQVYGKAKQPCPHCGEPLCEQK---IAQRNTFFCPQCQ 268