Pairwise Alignments

Query, 589 a.a., large component of pyruvate/D-alanine transporter (actP-like) (from data) from Pseudomonas stutzeri RCH2

Subject, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

 Score =  117 bits (292), Expect = 2e-30
 Identities = 127/571 (22%), Positives = 225/571 (39%), Gaps = 84/571 (14%)

Query: 18  YIGIAVWARAGSTKEFYVAGGGVHPVTNGMATAADWMSAASFISMAGLIASGGYATSVYL 77
           Y+G   W    S +++ V G  +HP    M+  A ++S A+ +   G   SG +  S+  
Sbjct: 19  YLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVGFGGF--SGLFGMSLLW 76

Query: 78  MGWTG---GYVLLAMLLAPYLRKFGK----FTVPDFIGDRFYSRGARLTAVVCLILISVT 130
           + +     G  +  +      RK G      T P+ +  RF S+  +  + + +      
Sbjct: 77  LTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKFIQWFSGLLIFCAMPI 136

Query: 131 YVIGQMAGAGVAFSRFLEVSNSAGIWIAAAIVFAYAVFGGMKGITYTQVAQYIVLIIAYT 190
           Y    + GA       L +S    + + + I+  Y V GG+KG+ YT   Q  ++     
Sbjct: 137 YAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMYTDAFQGTIMFFGML 196

Query: 191 IPAVFIAMQLTGNPIPMFGMFGTHVDSGVPLLDKLDQVVTDLGFAAYTADVDNKLNMFLF 250
              +++   + G          +++   VP        +  +G A +T+       M+  
Sbjct: 197 F-LLYMTYDILGGVTTAHQAI-SNMSGLVPAN------LASVGHAGWTSMPTFGSPMWWT 248

Query: 251 TLSLMI-----GTAGLPHVIIRFFTVPKVADARWSAGWTLVFIALLYLTAPAVASMARLN 305
            +S +I     G    P +I+RF TV    +   +     VFI +   TA  V +++ + 
Sbjct: 249 IVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAYVVGTLSNVY 308

Query: 306 LVNTIYPEGPQAEAIRYEDRPEWVQTWERTGLIKWEDKNADGRVQMYNDANAKFTPTATE 365
            +NT                 E V +   T    +   N+D  + +Y             
Sbjct: 309 FMNT-----------------EGVLSIGATVSEAFPTGNSDSIMPLY------------- 338

Query: 366 RGWNGNELTVNNDIIVLANPEIANLPGWVIGLIAAGAIAAALSTAAGLLLAISSAISHDL 425
                    +N             +P W I +     +AAA+ST +    A  ++I  D+
Sbjct: 339 ---------INKA-----------MPEWFIYIFLVSLLAAAMSTISSQFHAQGTSIGRDV 378

Query: 426 IKTLINPKISEKNEMLAARLSMTAAILLATWLG-LNPPGFAAQVVALAFGLAAASLFPAL 484
            +T+   K    N ++  RL +  AI++A  LG + P G  A+  AL FGL +A+  PA 
Sbjct: 379 YETICGKK--GLNSVIITRLGIIVAIVIAAILGYILPGGIVARGTALFFGLCSAAFLPAY 436

Query: 485 MMGIFSKRVNSKGAVAGMLVGV-ISTAVYIFLYLGWFFIPGTASIPNTPD-----QWWMG 538
            +G+F KR   +GA+AG+L G  +S    +F++       G + +    D       W  
Sbjct: 437 ALGLFWKRTTKEGAIAGLLTGTFVSLFCLVFIHQAESAALGISKMLIGRDVLISAMPWPY 496

Query: 539 ISPQAFGAVGAMLNFAVAYAVSMATEAPPQE 569
           + P     +   L F     VS+ T+AP +E
Sbjct: 497 VDPM---VISLPLAFIATVIVSLLTKAPSKE 524