Pairwise Alignments

Query, 441 a.a., Superfamily II DNA and RNA helicases from Pseudomonas stutzeri RCH2

Subject, 641 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  294 bits (752), Expect = 6e-84
 Identities = 154/366 (42%), Positives = 233/366 (63%), Gaps = 7/366 (1%)

Query: 2   TFASLGLIDPLLRTLETLDYRKPTPVQIEAIPAVLKGRDLMAAAQTGTGKTAGFALPLLQ 61
           TFA LGL +P+L+ L  + Y  P+ +Q E IP +++G+DL+  AQTGTGKTA FALPLLQ
Sbjct: 7   TFAQLGLSEPILQALTDVGYETPSSIQAECIPLLMEGKDLLGMAQTGTGKTAAFALPLLQ 66

Query: 62  RLTMEGAKVASNSVRALVLVPTRELAEQVHESFRVYGQNLP-LRTYAVYGGVSINPQMMA 120
           +L      V     +ALVL PTRELA QV E+ + Y ++LP      +YGG S+  Q+  
Sbjct: 67  KLD-----VTQRFPQALVLAPTRELAIQVAEACQKYAKHLPGFHVLPIYGGQSLGIQLKQ 121

Query: 121 LRKGIDVLVATPGRLLDLYRQNAVGFNQLQALVLDEADRMLDLGFADELDQLFSALPKKR 180
           L++G  V++ TPGR++D   + ++  ++L+ LVLDEAD ML +GF D+++ +   +P +R
Sbjct: 122 LQRGAHVIIGTPGRVMDHLERKSLDLSRLKTLVLDEADEMLRMGFIDDVEWILEHIPAER 181

Query: 181 QTLLFSATFSEAIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSELFLHLL- 239
           QT LFSAT  E IR++A++ LRDP  V++    +    ++Q    V    K +    ++ 
Sbjct: 182 QTALFSATMPEQIRRVAQKYLRDPQEVKIKSATSTVSAIQQRYWQVSGLHKLDALTRIME 241

Query: 240 AEKRWGQVLVFVKTRKGVDQLVDELQAAGISSDAIHGDKPQASRLRALERFKAGEVQVLV 299
            E      ++FV+T+   ++L  +L+A G ++ A++GD  QASR R +E+ K+G + +++
Sbjct: 242 VEDSLDAAIIFVRTKTATEELAQKLEARGYAAAALNGDMNQASRERVIEQLKSGGLDIVI 301

Query: 300 ATDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVSADEVDQLAAI 359
           ATDVAARG+D+  +  V+N+D+P   E YVHRIGRTGRAG TG A+  VS  E+  L  I
Sbjct: 302 ATDVAARGIDVPRVSHVINYDIPYDVEAYVHRIGRTGRAGRTGTAILFVSPREMRMLRTI 361

Query: 360 ETLINQ 365
           E +  Q
Sbjct: 362 EKVTRQ 367