Pairwise Alignments

Query, 169 a.a., Uncharacterized protein conserved in archaea from Pseudomonas stutzeri RCH2

Subject, 308 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 22/159 (13%)

Query: 1   MSRVLFLAGLLAL-PAFAAEPTLYGRYEHIKIEEIGKTLPAKMDTGAMTASLSARDIEQF 59
           +++ L L  L  L PA+  +  + G+   + ++E G    A++DTGA   SL A D+E  
Sbjct: 20  LTKALTLVALFLLAPAYGDDKAVIGQTAMMTVDEAGLVYQARIDTGAGNTSLHAFDLEIQ 79

Query: 60  ERDGEDWVRFRLAVDGADDTLY--------EQRLLGISRIKTRAEESGNVDPHREPPRAE 111
               +         D    T++        E++ L    +KT    +             
Sbjct: 80  GGSAKKMA------DNVGKTIWFTTENVAGERKRLSAKIVKTSTVSNSQ-------GTET 126

Query: 112 RPIVGMQLCIGDQLRDVEVNLTDRTHFSYPLLIGAETIR 150
           R +V M +    + R V+VNL DR H  Y LLIG   ++
Sbjct: 127 RYMVEMHVGFAGETRKVKVNLRDRGHMDYKLLIGRNWLK 165



 Score = 31.6 bits (70), Expect = 1e-05
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 22/136 (16%)

Query: 18  AEPTLYGRYEHIKIEEIGKTLPAKMDTGAMTASLSARD------IEQFERDGEDWVRFRL 71
           +E  + G    I I E G     ++DTGA+  SL A D      +E  E++    + F  
Sbjct: 173 SEKRVIGARAPISILETGLLFDTRIDTGAVENSLHAVDLKVENGVEDMEQNVGKMLAFTT 232

Query: 72  AVDGADDTLYEQRLLGISRIKTRAEESGNVDPHREPPRAERPIVGMQLCIGDQLRD--VE 129
             +  +      R++  S I+                +       ++L +G+  R+  V+
Sbjct: 233 ENEKGETKRVHARIVETSLIRN--------------AQGSEVRYMVELNVGEPGREYKVK 278

Query: 130 VNLTDRTHFSYPLLIG 145
           VNL DRT  +  LLIG
Sbjct: 279 VNLRDRTKMTNKLLIG 294