Pairwise Alignments

Query, 459 a.a., Superfamily II DNA and RNA helicases from Pseudomonas stutzeri RCH2

Subject, 461 a.a., ATP-dependent RNA helicase RhlE from Enterobacter sp. TBS_079

 Score =  255 bits (651), Expect = 2e-72
 Identities = 153/363 (42%), Positives = 216/363 (59%), Gaps = 8/363 (2%)

Query: 5   AFSSLPLSAAMLANLDALGYAAMTPIQAQSLPVMLKGHDLIAQAKTGSGKTAAFGIALLE 64
           +F SL L+  +L  +   GY   TPIQ Q++P +L+G DL+A A+TG+GKTA F + LLE
Sbjct: 2   SFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLLE 61

Query: 65  PL---NPRYFG---CQALVLCPTRELADQVAKELRRLARAADNIKILTLCGGVSIGPQIA 118
            L    P   G    +AL+L PTRELA Q+ + +R  +R   NI+ L + GGVSI PQ+ 
Sbjct: 62  LLVKNQPHAKGRRPVRALILTPTRELAAQIGENVREYSRYL-NIRSLVVFGGVSINPQMM 120

Query: 119 SLEHGAHVIVGTPGRVQEHLKKGTLKLDGLNTLVLDEADRMLDMGFYDAIAEIIGQTPAR 178
            L  G  V+V TPGR+ +   +  LKLD +  LVLDEADRMLDMGF   I  ++ + P R
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNALKLDSIEILVLDEADRMLDMGFIHDIRRVLAKLPPR 180

Query: 179 RQTLLFSATYPAGIKQLSASFMRDPQQVR-AEALHDDAQIEQRFYEIDPEQRMEAVTRLL 237
           RQ LLFSAT+   IK L+   + +P +V  A       QI Q  + +D +++ E ++ ++
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKRELLSHMI 240

Query: 238 ASFRPESCVAFCFTKQQCQELVDHLSANGISAMALNGDLEQRDRDQVLAMFANRSLSVLV 297
                +  + F  TK     L + L+ +GI + A++G+  Q  R + LA F +  + VLV
Sbjct: 241 GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAEFKSGDIRVLV 300

Query: 298 ATDVAARGLDIDALDMVINVELARDAEIHVHRVGRTGRAGNQGLAVSLVAPAEAHRAQAI 357
           ATD+AARGLDI+ L  V+N EL    E +VHR+GRTGRA   G A+SLV   E    + I
Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360

Query: 358 EKL 360
           E+L
Sbjct: 361 ERL 363