Pairwise Alignments

Query, 732 a.a., hypothetical membrane protein, TIGR01666 from Pseudomonas stutzeri RCH2

Subject, 725 a.a., TIGR01666 family membrane protein from Vibrio cholerae E7946 ATCC 55056

 Score =  612 bits (1578), Expect = e-179
 Identities = 324/714 (45%), Positives = 459/714 (64%), Gaps = 7/714 (0%)

Query: 4   PSLSQSLRRLWALEKFGYSLRVLIAMAGSMGLSWYLGQPTLIIPLFLGIIASALAETDDS 63
           P ++Q LR  WA +   YS+ +L+ + G +  +WY    T I PL LG+IA+ALA+ DD 
Sbjct: 6   PKINQ-LRLYWANKTVNYSVLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDR 64

Query: 64  WLGRLNALLVTLLCFSIAAVAVELLFPYPWLFVAGLAVSTFALVMLGALGERYGAIAQAT 123
           + GRL ++++TL+CF+IAA ++E+LF  PWLF  GL  S+F  +MLGA+G RY +IA A+
Sbjct: 65  FSGRLKSIILTLICFAIAAFSIEILFQTPWLFALGLFTSSFGFIMLGAMGARYASIAFAS 124

Query: 124 LILAIYSMIAADQRNGELQHFWRDPLLLVAGAAWYGLLSVCWNALFAHQPVQQSLARLYR 183
           L++A+Y+M+ A Q      + W  PLLL++G+AWY L+S+ W+A +  QPVQQ+LA ++ 
Sbjct: 125 LLVAVYTMLGAHQST----NIWFQPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFL 180

Query: 184 ELGLYFRYKAALFEPVRQLDVEQRRLELAQQNGRVVNALNAAKETLLHRLGNGRAGGKIN 243
           +L  Y   K+ LF PV  +  +  R+  A  N   VNALN  K   L R   G      +
Sbjct: 181 QLANYLEAKSTLFHPVSNMIPQPHRIIEANLNAATVNALNQCKAVFLTRSKRGHVDSASD 240

Query: 244 HYLKLYFLAQDLHERVSSSHYPYQALAEAFFHSDVLFRCQRLLRLQASACAELGETIQLR 303
            +L +YFLAQD+HERVSSSHY YQ LA+ F  SD+LFR + LL  QA AC ++ ++I+L 
Sbjct: 241 RFLNIYFLAQDIHERVSSSHYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLG 300

Query: 304 QAFRYSEANGQALEDLQASLEHLREQNNPAWRGLLRSLRALSGNLSTLQRQLASASDPGT 363
            ++++  A+  AL++LQ SL +LR+Q    W+ LL  L  L  NL+T+++QL + S+P  
Sbjct: 301 HSYQHDSASIVALDELQLSLSYLRQQERRDWKSLLGQLGYLFNNLATVEKQLNNVSNPDV 360

Query: 364 LEGEQDNSLLDRQPQTLREAFNRIRLQLTPTSLLFRHALRMTIALITGYAVLHAIHPEQG 423
            + E+   L D +  TL   + RIR  L   SLLFRHALR++I L  GYA++     E+G
Sbjct: 361 AKPEE-GVLDDTEAHTLGSMWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERG 419

Query: 424 YWVLLTTVFVCQPNYGATRIKLVQRISGTVLGLVAGWALFDLFPSQPIQALFAVVAGVVF 483
           YW+LLTT+FVCQPNY AT+ KL  RI GT+ GL+ G  L   FPSQ  Q +F V +GV+F
Sbjct: 420 YWILLTTLFVCQPNYAATKQKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMF 479

Query: 484 FATRSTRYTLATAAITLMVLFCFNQVGDGYGLIWPRLFDTLLGSLIAAAAVFLILPDWQG 543
           FA R   Y  AT  ITL+VLFCFNQ+G+GY ++ PRL DTL+G  +A AAV LILPDWQ 
Sbjct: 480 FAFRLNNYGYATGFITLLVLFCFNQLGEGYAVVLPRLADTLIGCALAVAAVVLILPDWQS 539

Query: 544 RRLNQVVANTLSCNSDYLRQIMRQYDSGKRDDLAYRLARRNAHNADAALSTTLSNMLLEP 603
           +RL++V+A  +  N  YL QI+ QY  GK+D L+YR+ARR+AHN DAALS  ++NML EP
Sbjct: 540 KRLHKVMAEAIDANKQYLAQIIGQYRIGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEP 599

Query: 604 GHFRKDAETGFRFLILSHTLLNYLSGLGAHRESLPDDARDALLESAAQQLAASLDDLAAA 663
           G +R  A+  FRFL L+H LL+Y+S LGAHR  L D+    L+  + + +   LD L   
Sbjct: 600 GRYRAAADESFRFLTLNHALLSYISALGAHRTRLDDETVHQLVLDSHRVIHQHLDLLHQQ 659

Query: 664 LAQN-RPIAIYSEEEEALAQQLEQTPDEMDDAHRLVQTQLGLICRQLAPLRSMA 716
           L+ +         +   L ++L +  ++ + + R+V  QL LI R L  L ++A
Sbjct: 660 LSNHCEECDTSGIDSSGLEKRLAEWREDDEGSARMVLQQLHLIYRMLPELHTLA 713